RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 TRAV27A0A087WT01 109 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 TRBV9A0A0B4J1U6 114 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 PIGBOS1A0A0B4J2F0 54 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 HIDE1A8MVS5 230 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 C17orf105B2RV13 164 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 DIRC3C9JPN6 131 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 HS3ST1O14792 307 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 TAX1BP3O14907 124 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 NDUFS4O43181 175 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 TMPRSS11DO60235 418 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 ZNF253O75346 499 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 B3GAT3O94766 335 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 ZIC2O95409 532 aaPredicted RBP5.2□□□□□ -1.58
LINC01340-201ENST00000504012 GPX1P07203 203 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 DBHP09172 617 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 C1QTNF9P0C862 333 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 IGLC1P0CG04 106 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 FUT1P19526 365 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 ZNF10P21506 573 aaPredicted RBP5.2□□□□□ -1.58
LINC01340-201ENST00000504012 CCKBRP32239 447 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 PTGER4P35408 488 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 NPBWR2P48146 333 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 REG1BP48304 166 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 SPINT3P49223 89 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 RPS4XP62701 263 aaKnown RBP5.2□□□□□ -1.58
LINC01340-201ENST00000504012 RPL23P62829 140 aaKnown RBP5.2□□□□□ -1.58
LINC01340-201ENST00000504012 SERF2P84101 59 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 SLC22A6Q4U2R8 563 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 ZNF658BQ4V348 819 aaPredicted RBP5.2□□□□□ -1.58
LINC01340-201ENST00000504012 TCTEX1D4Q5JR98 221 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 WDR38Q5JTN6 314 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 ASPHD2Q6ICH7 369 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 MFSD12Q6NUT3 480 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 C12orf54Q6X4T0 127 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 DPY19L4Q7Z388 723 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 NEGR1Q7Z3B1 354 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 SLC39A11Q8N1S5 342 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 SLC22A24Q8N4F4 322 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 DEFB125Q8N687 156 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 GVQW1Q8N7I0 195 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 SIGLECL1Q8N7X8 197 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 ZNF709Q8N972 641 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 DCAF4L2Q8NA75 395 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 FER1L6-AS1Q8NA97 138 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 LINC01555Q8NAE3 123 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 OR5A2Q8NGI9 324 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 OR4P4Q8NGL7 312 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 OR11L1Q8NGX0 322 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 OR2AJ1Q8NGZ0 328 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 OR10AC1Q8NH08 325 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 VN1R17PQ8TDU5 208 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 ADIPOR1Q96A54 375 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 STARD4Q96DR4 205 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 C18orf12Q96KH6 178 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 GUCD1Q96NT3 240 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 SDF2Q99470 211 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 SIGMAR1Q99720 223 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 HSPB9Q9BQS6 159 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 PSMG3Q9BT73 122 aaPredicted RBP5.2□□□□□ -1.58
LINC01340-201ENST00000504012 LANCL2Q9NS86 450 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 TMEM38BQ9NVV0 291 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 HHLA2Q9UM44 414 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 SLC22A13Q9Y226 551 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 SLC5A6Q9Y289 635 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 TBL2Q9Y4P3 447 aaKnown RBP5.2□□□□□ -1.58
LINC01340-201ENST00000504012 INSL6Q9Y581 213 aa5.2□□□□□ -1.58
LINC01340-201ENST00000504012 ANAPC1Q9H1A4 1944 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 TMEM189A5PLL7 270 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 LIPT2A6NK58 231 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 C4orf47A7E2U8 309 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 OR11H12B2RN74 326 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 C17orf112F2Z3M2 114 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 P2RY10O00398 339 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 HCRTR1O43613 425 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 EFEMP2O95967 443 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 MT-CO2P00403 227 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 NRASP01111 189 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 KRASP01116 189 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 CGAP01215 116 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 NGFRP08138 427 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 ERGP11308 486 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 PSG1P11464 419 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 GLB1P16278 677 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 HIST1H1DP16402 221 aaKnown RBP5.19□□□□□ -1.58
LINC01340-201ENST00000504012 KITLGP21583 273 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 HNRNPA2B1P22626 353 aaKnown RBP5.19□□□□□ -1.58
LINC01340-201ENST00000504012 CMPK1P30085 196 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 OTX2P32243 289 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 MDH2P40926 338 aaKnown RBP5.19□□□□□ -1.58
LINC01340-201ENST00000504012 SLC6A8P48029 635 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 CEBPDP49716 269 aaPredicted RBP5.19□□□□□ -1.58
LINC01340-201ENST00000504012 PPOXP50336 477 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 RHOBP62745 196 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 ZNF154Q13106 437 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 TMEM187Q14656 261 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 ACKR1Q16570 336 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 HIST3H3Q16695 136 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 CCSMST1Q4G0I0 132 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 OR10J3Q5JRS4 329 aa5.19□□□□□ -1.58
LINC01340-201ENST00000504012 MRPL54Q6P161 138 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms