RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 ALDH3A2P51648 485 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 LOXL3P58215 753 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ZP1P60852 638 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 AESQ08117 197 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 IL18R1Q13478 541 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ZSCAN26Q16670 478 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 C17orf58Q2M2W7 97 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 PRAMEF5Q5TYX0 476 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 MEDAGQ5VYS4 303 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ACBD7Q8N6N7 88 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 Q8NFD4 153 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 NDNFQ8TB73 568 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ZNF596Q8TC21 504 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 RNFT2Q96EX2 444 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 RBM14Q96PK6 669 aaKnown RBP9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 SPACA5Q96QH8 159 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 NCOR1P1Q9H4R4 102 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ZNF286AQ9HBT8 521 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 EXOSC4Q9NPD3 245 aaKnown RBP9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 AURKAIP1Q9NWT8 199 aaPredicted RBP9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 GLS2Q9UI32 602 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 GSTK1Q9Y2Q3 226 aa9.77□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 TRGV10A0A0A0MS01 117 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 DAPL1A0PJW8 107 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ODAMA1E959 279 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 FUOMA2VDF0 154 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 LEUTXA8MZ59 168 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 BUB1B-PAK6H3BSN5 160 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 PIN1P1O15428 100 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 OR2F2O95006 317 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 HTR1AP08908 422 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 CD24P25063 80 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 PAX5Q02548 391 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ALKBH1Q13686 389 aaKnown RBP9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 HLA-DRB5Q30154 266 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 FOXB2Q5VYV0 432 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ELP2Q6IA86 826 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ZNF529Q6P280 563 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 PARP16Q8N5Y8 322 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 CHST4Q8NCG5 386 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 RFT1Q96AA3 541 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 LGALS12Q96DT0 336 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 GAL3ST2Q9H3Q3 398 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ZCCHC4Q9H5U6 513 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 MYRFQ9Y2G1 1151 aa9.76□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 OOSP1A8MZH6 123 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 H3BUI4 141 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ZNF20P17024 532 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 BRS3P32247 399 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 SNU13P55769 128 aaKnown RBP9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 GALEQ14376 348 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ASCL4Q6XD76 172 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 TRAPPC6BQ86SZ2 158 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 THNSL2Q86YJ6 484 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 SYS1Q8N2H4 156 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 PQLC1Q8N2U9 271 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 OR51T1Q8NGJ9 327 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 OR13C9Q8NGT0 318 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 CREB3L1Q96BA8 519 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 C4orf36Q96KX1 117 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 AASSQ9UDR5 926 aa9.75□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 TRAV24A0A0B4J272 114 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 KBTBD11-OT1A0A1B0GTJ5 212 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ZNF729A6NN14 1252 aaPredicted RBP9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 E9PI62 339 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 J3QLW9 94 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 EI24O14681 340 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 PEX14O75381 377 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ZFPL1O95159 310 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 BAG2O95816 211 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 IGLL1P15814 213 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ZNF19P17023 458 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 KISS1Q15726 138 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ABCA11PQ4W5N1 156 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 KRBOX4Q5JUW0 171 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 TPTE2P1Q5T6R2 138 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 C10orf99Q6UWK7 81 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 CBR4Q8N4T8 237 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 PXT1Q8NFP0 134 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 OR5D18Q8NGL1 313 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 OR13C3Q8NGS6 347 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 RHOXF1Q8NHV9 184 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 MRAPQ8TCY5 172 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 MYDGFQ969H8 173 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 KIRREL1Q96J84 757 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 AKR1E2Q96JD6 320 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 SLC25A33Q9BSK2 321 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 PPIL3Q9H2H8 161 aaKnown RBP9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 ISG20L2Q9H9L3 353 aaKnown RBP9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 C8orf4Q9NR00 106 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 MRPS18AQ9NVS2 196 aaKnown RBP9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 IMPAD1Q9NX62 359 aa9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 TSSC4Q9Y5U2 329 aaPredicted RBP9.74□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 FAM172BPA6NC97 362 aa9.73□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 SNTNA6NMZ2 147 aa9.73□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 NPIPB11E5RHQ5 1161 aa9.73□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 DEGS1O15121 323 aa9.73□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 SULT1B1O43704 296 aa9.73□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 LPLP06858 475 aa9.73□□□□□ -0.85
MSH5-SAPCD1-205ENST00000476085 RPSAP08865 295 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms