RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 FAM90A5PA8MXJ8 464 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 F2RL2O00254 374 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 DEGS1O15121 323 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 ATP5HO75947 161 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 ALX3O95076 343 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 IGHV3-7P01780 117 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 CSN2P05814 226 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 LPLP06858 475 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 HTR1AP08908 422 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 FAM90A15PP0C7V4 464 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 FAM90A13PP0C7W8 464 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 FAM90A14PP0C7W9 464 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 FAM90A24PP0C7X0 464 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 IGLL1P15814 213 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 ZNF20P17024 532 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 CD34P28906 385 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 RASSF2P50749 326 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 ALDH3A2P51648 485 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 GTF2A1P52655 376 aaPredicted RBP5.59□□□□□ -1.51
HDAC3-207ENST00000475549 KRTAP10-11P60412 298 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 ALKBH1Q13686 389 aaKnown RBP5.59□□□□□ -1.51
HDAC3-207ENST00000475549 GALEQ14376 348 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 KPNB1Q14974 876 aaKnown RBP5.59□□□□□ -1.51
HDAC3-207ENST00000475549 KISS1Q15726 138 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 LINC01559Q495D7 138 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 ABCA11PQ4W5N1 156 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 MEDAGQ5VYS4 303 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 FOXB2Q5VYV0 432 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 XAF1Q6GPH4 301 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 ZNF529Q6P280 563 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 ZBTB49Q6ZSB9 765 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 FAM220AQ7Z4H9 259 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 TRAPPC6BQ86SZ2 158 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 SAXO1Q8IYX7 474 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 CBR4Q8N4T8 237 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 PARP16Q8N5Y8 322 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 ACBD7Q8N6N7 88 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 DTX3Q8N9I9 347 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 OR4F17Q8NGA8 305 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 OR51A2Q8NGJ7 313 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 OR13A1Q8NGR1 328 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 OR13C3Q8NGS6 347 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 APH1BQ8WW43 257 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 RGP1Q92546 391 aaPredicted RBP5.59□□□□□ -1.51
HDAC3-207ENST00000475549 PHF21AQ96BD5 680 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 RBM14Q96PK6 669 aaKnown RBP5.59□□□□□ -1.51
HDAC3-207ENST00000475549 OR4F4Q96R69 305 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 ZCCHC4Q9H5U6 513 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 LINC00574Q9H8X3 128 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 EXOSC4Q9NPD3 245 aaKnown RBP5.59□□□□□ -1.51
HDAC3-207ENST00000475549 AURKAIP1Q9NWT8 199 aaPredicted RBP5.59□□□□□ -1.51
HDAC3-207ENST00000475549 IMPAD1Q9NX62 359 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 TAS2R3Q9NYW6 316 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 PITPNC1Q9UKF7 332 aa5.59□□□□□ -1.51
HDAC3-207ENST00000475549 NBEAL2Q6ZNJ1 2754 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 DNAH3Q8TD57 4116 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 TRAV39A0A0B4J263 110 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 KBTBD11-OT1A0A1B0GTJ5 212 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 LEUTXA8MZ59 168 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 HSPB6O14558 160 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 XPNPEP2O43895 674 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 OR2F2O95006 317 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 CYB5AP00167 134 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 TMEM225BP0DP42 221 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 DBTP11182 482 aaKnown RBP5.58□□□□□ -1.52
HDAC3-207ENST00000475549 ZNF44P15621 663 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 VDAC2P45880 294 aaPredicted RBP5.58□□□□□ -1.52
HDAC3-207ENST00000475549 OR3A4PP47883 348 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 LOXL3P58215 753 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 ATXN7L3Q14CW9 347 aaPredicted RBP5.58□□□□□ -1.52
HDAC3-207ENST00000475549 HLA-DRB5Q30154 266 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 KRBOX4Q5JUW0 171 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 TPTE2P1Q5T6R2 138 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 ELP2Q6IA86 826 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 OR52W1Q6IF63 320 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 FAM53AQ6NSI3 398 aaPredicted RBP5.58□□□□□ -1.52
HDAC3-207ENST00000475549 ASCL4Q6XD76 172 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 CCDC121Q6ZUS5 278 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 CENPVQ7Z7K6 275 aaPredicted RBP5.58□□□□□ -1.52
HDAC3-207ENST00000475549 RTN4RL2Q86UN3 420 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 SERPINA12Q8IW75 414 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 SYS1Q8N2H4 156 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 CHST4Q8NCG5 386 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 Q8NFD4 153 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 OR51T1Q8NGJ9 327 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 OR5D14Q8NGL3 314 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 ZNF596Q8TC21 504 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 STMN2Q93045 179 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 LEAP2Q969E1 77 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 MYDGFQ969H8 173 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 RBMXL1Q96E39 390 aaKnown RBP5.58□□□□□ -1.52
HDAC3-207ENST00000475549 KIRREL1Q96J84 757 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 SLC25A33Q9BSK2 321 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 ALG8Q9BVK2 526 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 LIN7BQ9HAP6 207 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 RHOFQ9HBH0 211 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 INPP5EQ9NRR6 644 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 MRPS18AQ9NVS2 196 aaKnown RBP5.58□□□□□ -1.52
HDAC3-207ENST00000475549 NECAP2Q9NVZ3 263 aa5.58□□□□□ -1.52
HDAC3-207ENST00000475549 ERVK13-1Q9NX77 482 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms