RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 MPV17LQ2QL34 196 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 CLDND2Q8NHS1 167 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 SYT3Q9BQG1 590 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 CRLF2Q9HC73 371 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 KIAA1456Q9P272 454 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 UBE2J1Q9Y385 318 aaPredicted RBP10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 EML6Q6ZMW3 1958 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 A0A087X0M5 115 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 A0A1B0GX30 115 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 HLA-HP01893 362 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 MMP9P14780 707 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 SPINK2P20155 84 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 FUT3P21217 361 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 SUMO3P55854 103 aaPredicted RBP10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 HERV-K104P61576 105 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF266Q14584 549 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 CLEC12BQ2HXU8 276 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 OR2M3Q8NG83 312 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 MOB3AQ96BX8 217 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF501Q96CX3 271 aaPredicted RBP10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 POM121Q96HA1 1249 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 FAM210BQ96KR6 192 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 TMED3Q9Y3Q3 217 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 AQP7P3A6NL99 342 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 ZFP92A6NM28 416 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 PPYP01298 95 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 DDTP30046 118 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 FGF8P55075 233 aaPredicted RBP10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 NKAIN1Q4KMZ8 207 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 RTL6Q6ICC9 239 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 TBC1D26Q86UD7 250 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 C17orf82Q86X59 251 aaPredicted RBP10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 CMTM1Q8IZ96 169 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 ANGPTL4Q9BY76 406 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 SLC7A10Q9NS82 523 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 TRDCB7Z8K6 153 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 CHST1O43916 411 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF774Q6NX45 483 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF695Q8IW36 515 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 VSIRQ9H7M9 311 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF442Q9H7R0 627 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 PLEKHF2Q9H8W4 249 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 AKIRIN1Q9H9L7 192 aaPredicted RBP10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 UCK1Q9HA47 277 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 C3orf80F5H4A9 247 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 ETV2O00321 342 aaPredicted RBP10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 HSPB6O14558 160 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 PITX3O75364 302 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 CD55P08174 381 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 DTYMKP23919 212 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 NPBWR2P48146 333 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 VAMP2P63027 116 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 HLA-DRB3P79483 266 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 AKR1C8PQ5T2L2 129 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF468Q5VIY5 522 aaPredicted RBP10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 THNSL2Q86YJ6 484 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 MISP3Q96FF7 219 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF286AQ9HBT8 521 aa10.87□□□□□ -0.67
CLCNKA-204ENST00000464764 A0A087WWC5 75 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 TERTO14746 1132 aaKnown RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 PHOX2AO14813 284 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 BCAT2O15382 392 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 TLX3O43711 291 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 OR7C1O76099 320 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 LCATP04180 440 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 CELA2AP08217 269 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 CD200P41217 278 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF506Q5JVG8 444 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 SP5Q6BEB4 398 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 LCN15Q6UWW0 184 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF100Q8IYN0 542 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF784Q8NCA9 323 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 BORCS8Q96FH0 119 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 PACRGQ96M98 296 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 CHRNA10Q9GZZ6 450 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 TMEM222Q9H0R3 208 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 UNKLQ9H9P5 680 aaKnown RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 LYRM2Q9NU23 88 aaPredicted RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 MYOTQ9UBF9 498 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 ARHGAP21Q5T5U3 1957 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 LMO7DNF2Z398 122 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 SNRPCP09234 159 aaKnown RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 IL2RGP31785 369 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 SHBQ15464 509 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 SLC25A53Q5H9E4 307 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF818PQ6ZRF7 136 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 DPPA2Q7Z7J5 298 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 SELENOHQ8IZQ5 122 aaKnown RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 OSR2Q8N2R0 312 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 HS3ST6Q96QI5 342 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 HIST1H2BLQ99880 126 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF665Q9H7R5 613 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 IGKV1D-13A0A0B4J2D9 117 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 A0A1W2PR77 199 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 BTBD17A6NE02 478 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 RPL36A-HNRNPH2H7BZ11 118 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 HSPA12AO43301 675 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 DHHO43323 396 aa10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 HSPB1P04792 205 aaKnown RBP10.86□□□□□ -0.67
CLCNKA-204ENST00000464764 IGKV1-13P0DP09 117 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms