RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CKLFQ9UBR5 152 aa9□□□□□ -0.97
HERC4-207ENST00000460168 PEF1Q9UBV8 284 aaKnown RBP9□□□□□ -0.97
HERC4-207ENST00000460168 A0A0G2JK05 382 aa9□□□□□ -0.97
HERC4-207ENST00000460168 SYT7O43581 403 aa9□□□□□ -0.97
HERC4-207ENST00000460168 PATE4P0C8F1 98 aa9□□□□□ -0.97
HERC4-207ENST00000460168 SLC2A2P11168 524 aaPredicted RBP9□□□□□ -0.97
HERC4-207ENST00000460168 EPXP11678 715 aa9□□□□□ -0.97
HERC4-207ENST00000460168 IRF2P14316 349 aa9□□□□□ -0.97
HERC4-207ENST00000460168 ZNF32P17041 273 aa9□□□□□ -0.97
HERC4-207ENST00000460168 AKR1C3P42330 323 aa9□□□□□ -0.97
HERC4-207ENST00000460168 HIST1H3AP68431 136 aa9□□□□□ -0.97
HERC4-207ENST00000460168 ARF1P84077 181 aaKnown RBP9□□□□□ -0.97
HERC4-207ENST00000460168 SMIM21Q3B7S5 101 aa9□□□□□ -0.97
HERC4-207ENST00000460168 NRN1LQ496H8 165 aa9□□□□□ -0.97
HERC4-207ENST00000460168 FAM180AQ6UWF9 173 aa9□□□□□ -0.97
HERC4-207ENST00000460168 HIST2H3AQ71DI3 136 aa9□□□□□ -0.97
HERC4-207ENST00000460168 ABHD12BQ7Z5M8 362 aaPredicted RBP9□□□□□ -0.97
HERC4-207ENST00000460168 LYG2Q86SG7 212 aa9□□□□□ -0.97
HERC4-207ENST00000460168 ADGRE4PQ86SQ3 457 aa9□□□□□ -0.97
HERC4-207ENST00000460168 NANOS1Q8WY41 292 aaKnown RBP9□□□□□ -0.97
HERC4-207ENST00000460168 SPTSSAQ969W0 71 aa9□□□□□ -0.97
HERC4-207ENST00000460168 KCTD12Q96CX2 325 aaKnown RBP9□□□□□ -0.97
HERC4-207ENST00000460168 PGAM5Q96HS1 289 aa9□□□□□ -0.97
HERC4-207ENST00000460168 ZNF71Q9NQZ8 489 aaPredicted RBP9□□□□□ -0.97
HERC4-207ENST00000460168 ZNF629Q9UEG4 869 aaPredicted RBP9□□□□□ -0.97
HERC4-207ENST00000460168 TNFRSF18Q9Y5U5 241 aa9□□□□□ -0.97
HERC4-207ENST00000460168 PIEZO2Q9H5I5 2752 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 PTPRQQ9UMZ3 2332 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 TRAV8-7A0A075B6U6 113 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 A0A096LPE4 126 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 TRBV5-7A0A0A0MS05 114 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 A0A1W2PPZ6 126 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 M0R135 149 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 RAMP3O60896 148 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 SULT1A3P0DMM9 295 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 SULT1A4P0DMN0 295 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 MPZP25189 248 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 ID4P47928 161 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 RAB35Q15286 201 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 SPATA46Q5T0L3 261 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 ZNF585AQ6P3V2 769 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 FAM57BQ71RH2 274 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 MED12LQ86YW9 2145 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 OR8B12Q8NGG6 310 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 OR13C8Q8NGS7 320 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 OR51E1Q8TCB6 317 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 ZNF799Q96GE5 643 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 FAM110AQ9BQ89 295 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 RSRP1Q9BUV0 290 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 PRSS50Q9UI38 385 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 TIMM10BQ9Y5J6 103 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 V9GY05 133 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 MAP1BP46821 2468 aaKnown RBP8.99□□□□□ -0.97
HERC4-207ENST00000460168 SS18L1O75177 396 aaPredicted RBP8.99□□□□□ -0.97
HERC4-207ENST00000460168 DBHP09172 617 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 ATF1P18846 271 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 CTSSP25774 331 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 GCH1P30793 250 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 SLC36A2Q495M3 483 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 FAM131AQ6UXB0 335 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 FGD2Q7Z6J4 655 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 LYG1Q8N1E2 194 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 ADAT1Q9BUB4 502 aaKnown RBP8.99□□□□□ -0.97
HERC4-207ENST00000460168 SEC11CQ9BY50 192 aa8.99□□□□□ -0.97
HERC4-207ENST00000460168 ARHGAP21Q5T5U3 1957 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 IFITM5A6NNB3 132 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 CCL25O15444 150 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 SYNGR3O43761 229 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 YIF1AO95070 293 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 FOXG1P55316 489 aaPredicted RBP8.98□□□□□ -0.97
HERC4-207ENST00000460168 PSG4Q00888 419 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 ACSF3Q4G176 576 aaPredicted RBP8.98□□□□□ -0.97
HERC4-207ENST00000460168 SFRP5Q5T4F7 317 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 FAM214BQ7L5A3 538 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 GLCCI1Q86VQ1 547 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 SAMD12Q8N8I0 201 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 CNEP1R1Q8N9A8 125 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 OR10W1Q8NGF6 305 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 OR1F12Q8NHA8 337 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 CMBLQ96DG6 245 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 OR2H1Q9GZK4 316 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 C20orf85Q9H1P6 137 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 BSNQ9UPA5 3926 aa8.98□□□□□ -0.97
HERC4-207ENST00000460168 CLEC18AA5D8T8 446 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 SLC19A2O60779 497 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 FAM87AP0C7U9 286 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 ADRA2CP18825 462 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 CXCL2P19875 107 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 OR3A2P47893 321 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 RPS20P60866 119 aaKnown RBP8.97□□□□□ -0.97
HERC4-207ENST00000460168 TMEM255AQ5JRV8 349 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 AKR1C8PQ5T2L2 129 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 CNIH2Q6PI25 160 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 CLEC18BQ6UXF7 455 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 MOB3CQ70IA8 216 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 CLEC18CQ8NCF0 446 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 FGFBP3Q8TAT2 258 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 ORAOV1Q8WV07 137 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 WNT2BQ93097 391 aa8.97□□□□□ -0.97
HERC4-207ENST00000460168 SPSB1Q96BD6 273 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms