RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 CEACAM3P40198 252 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 PRB3Q04118 309 aaPredicted RBP8.08□□□□□ -1.12
HDLBP-228ENST00000459788 EDDM3AQ14507 147 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 CDK5R1Q15078 307 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 NHLRC3Q5JS37 347 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 ZNF691Q5VV52 312 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 Q6P435 159 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 SLC16A12Q6ZSM3 486 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 LHFPL4Q7Z7J7 247 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 LINC00596Q86U02 117 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 ZNF565Q8N9K5 539 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 OR10A7Q8NGE5 316 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 TSEN15Q8WW01 171 aaKnown RBP8.08□□□□□ -1.12
HDLBP-228ENST00000459788 AKR1E2Q96JD6 320 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 PRSS22Q9GZN4 317 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 IFT22Q9H7X7 185 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 ISG20L2Q9H9L3 353 aaKnown RBP8.08□□□□□ -1.12
HDLBP-228ENST00000459788 PAK1IP1Q9NWT1 392 aaPredicted RBP8.08□□□□□ -1.12
HDLBP-228ENST00000459788 DPM3Q9P2X0 92 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 GSTK1Q9Y2Q3 226 aa8.08□□□□□ -1.12
HDLBP-228ENST00000459788 ODAMA1E959 279 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 MEGF11A6BM72 1044 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 LEUTXA8MZ59 168 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 F2RL2O00254 374 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 SLC33A1O00400 549 aaPredicted RBP8.07□□□□□ -1.12
HDLBP-228ENST00000459788 DEGS1O15121 323 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 OGG1O15527 345 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 CHST1O43916 411 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 ZNF780AO75290 641 aaPredicted RBP8.07□□□□□ -1.12
HDLBP-228ENST00000459788 IGLV1-47P01700 117 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 CSF1P09603 554 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 TMEM225BP0DP42 221 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 ZNF44P15621 663 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 MYL12AP19105 171 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 PTGFRP43088 359 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 PRRX1P54821 245 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 SRSF4Q08170 494 aaKnown RBP8.07□□□□□ -1.12
HDLBP-228ENST00000459788 FAM189A2Q15884 450 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 SSX2Q16385 188 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 LY6EQ16553 131 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 CCDC144NLQ6NUI1 221 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 TRAPPC6BQ86SZ2 158 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 CDH26Q8IXH8 852 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 BATF2Q8N1L9 274 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 OR4D6Q8NGJ1 314 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 OR4P4Q8NGL7 312 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 OR52N1Q8NH53 320 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 THRSPQ92748 146 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 SMIM19Q96E16 107 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 PDCD1LG2Q9BQ51 273 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 BARHL1Q9BZE3 327 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 CHST6Q9GZX3 395 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 LIN7BQ9HAP6 207 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 AMBNQ9NP70 447 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 TMEM138Q9NPI0 162 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 BABAM2Q9NXR7 383 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 IL36RNQ9UBH0 155 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 ZNF281Q9Y2X9 895 aa8.07□□□□□ -1.12
HDLBP-228ENST00000459788 E9PI62 339 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 M0QZK8 103 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 SIRPB1O00241 398 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 BAG2O95816 211 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 CD1AP06126 327 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 CGB3P0DN86 165 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 CGB7P0DN87 165 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 DUSP1P28562 367 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 C21orf33P30042 268 aaPredicted RBP8.06□□□□□ -1.12
HDLBP-228ENST00000459788 TAS2R43P59537 309 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 PPP3R1P63098 170 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 EMX1Q04741 257 aaPredicted RBP8.06□□□□□ -1.12
HDLBP-228ENST00000459788 DYNC1I2Q13409 638 aaKnown RBP8.06□□□□□ -1.12
HDLBP-228ENST00000459788 GPR176Q14439 515 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 PDLIM3Q53GG5 364 aaPredicted RBP8.06□□□□□ -1.12
HDLBP-228ENST00000459788 KRBOX4Q5JUW0 171 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 DYNAPQ8N1N2 210 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 ABHD12Q8N2K0 398 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 DHRSXQ8N5I4 330 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 NDNFQ8TB73 568 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 CNIH3Q8TBE1 160 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 WIPF2Q8TF74 440 aaPredicted RBP8.06□□□□□ -1.12
HDLBP-228ENST00000459788 TMEM106AQ96A25 262 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 TMEM80Q96HE8 168 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 GPER1Q99527 375 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 ZNF702PQ9H963 129 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 CHCHD3Q9NX63 227 aaKnown RBP8.06□□□□□ -1.12
HDLBP-228ENST00000459788 CNOT2Q9NZN8 540 aaKnown RBP8.06□□□□□ -1.12
HDLBP-228ENST00000459788 AASSQ9UDR5 926 aa8.06□□□□□ -1.12
HDLBP-228ENST00000459788 AMMECR1Q9Y4X0 333 aaPredicted RBP8.06□□□□□ -1.12
HDLBP-228ENST00000459788 KBTBD11-OT1A0A1B0GTJ5 212 aa8.05□□□□□ -1.12
HDLBP-228ENST00000459788 EFCAB10A6NFE3 127 aa8.05□□□□□ -1.12
HDLBP-228ENST00000459788 GABRPO00591 440 aa8.05□□□□□ -1.12
HDLBP-228ENST00000459788 CDK2P24941 298 aa8.05□□□□□ -1.12
HDLBP-228ENST00000459788 GLIPR1P48060 266 aa8.05□□□□□ -1.12
HDLBP-228ENST00000459788 ADARB1P78563 741 aaKnown RBP8.05□□□□□ -1.12
HDLBP-228ENST00000459788 SLC34A1Q06495 639 aa8.05□□□□□ -1.12
HDLBP-228ENST00000459788 AESQ08117 197 aa8.05□□□□□ -1.12
HDLBP-228ENST00000459788 RSU1Q15404 277 aa8.05□□□□□ -1.12
HDLBP-228ENST00000459788 MPV17LQ2QL34 196 aa8.05□□□□□ -1.12
HDLBP-228ENST00000459788 HLA-DRB5Q30154 266 aa8.05□□□□□ -1.12
HDLBP-228ENST00000459788 YIF1BQ5BJH7 314 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms