RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ABCA11PQ4W5N1 156 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 SPIN3Q5JUX0 258 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 C11orf87Q6NUJ2 197 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 ZNF474Q6S9Z5 364 aaPredicted RBP13.35□□□□□ -0.27
SNX13-204ENST00000444712 SLC7A5P1Q8MH63 180 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 ZNF680Q8NEM1 530 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 SYT3Q9BQG1 590 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 DPCDQ9BVM2 203 aaPredicted RBP13.35□□□□□ -0.27
SNX13-204ENST00000444712 CRYM-AS1A6NIL9 109 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 DEGS1O15121 323 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 DIRAS3O95661 229 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 KNG1P01042 644 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 GLI4P10075 376 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 RPS2P15880 293 aaKnown RBP13.34□□□□□ -0.27
SNX13-204ENST00000444712 FCGR2CP31995 323 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 HTR2BP41595 481 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 ERVK11-1P61568 191 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 NAAAQ02083 359 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 SHEQ5VZ18 495 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 MOB1BQ7L9L4 216 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 WDR86Q86TI4 376 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 CCDC71LQ8N9Z2 235 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 THAP6Q8TBB0 222 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 GLS2Q9UI32 602 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 MAB21L2Q9Y586 359 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 ATP23Q9Y6H3 246 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 TRAV14DV4A0A0A6YYC5 116 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 A0A0D9SG52 128 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 TEX13DA0A0J9YY54 714 aaPredicted RBP13.34□□□□□ -0.27
SNX13-204ENST00000444712 RP2O75695 350 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 RHBDL1O75783 438 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 TK1P04183 234 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 SERPINF1P36955 418 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 ZNF345Q14585 488 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 RGS7BPQ6MZT1 257 aaPredicted RBP13.34□□□□□ -0.27
SNX13-204ENST00000444712 TMUB2Q71RG4 321 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 ZNF546Q86UE3 836 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 PPP1R1CQ8WVI7 109 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 S100PBPQ96BU1 408 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 ZNF488Q96MN9 340 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 HS3ST6Q96QI5 342 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 NRIP2Q9BQI9 281 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 MFFQ9GZY8 342 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 IL36RNQ9UBH0 155 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 UBQLN2Q9UHD9 624 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 MEMO1Q9Y316 297 aa13.34□□□□□ -0.27
SNX13-204ENST00000444712 CUL9Q8IWT3 2517 aa13.33□□□□□ -0.28
SNX13-204ENST00000444712 TRDCB7Z8K6 153 aa13.33□□□□□ -0.28
SNX13-204ENST00000444712 NXPH2O95156 264 aa13.33□□□□□ -0.28
SNX13-204ENST00000444712 ZNF44P15621 663 aa13.33□□□□□ -0.28
SNX13-204ENST00000444712 ALKBH6Q3KRA9 238 aa13.33□□□□□ -0.28
SNX13-204ENST00000444712 SSX8Q7RTT4 187 aa13.33□□□□□ -0.28
SNX13-204ENST00000444712 MRGPRGQ86SM5 289 aa13.33□□□□□ -0.28
SNX13-204ENST00000444712 FAM185AQ8N0U4 392 aa13.33□□□□□ -0.28
SNX13-204ENST00000444712 RPRMLQ8N4K4 120 aa13.33□□□□□ -0.28
SNX13-204ENST00000444712 POC1AQ8NBT0 407 aa13.33□□□□□ -0.28
SNX13-204ENST00000444712 TOMM40LQ969M1 308 aa13.33□□□□□ -0.28
SNX13-204ENST00000444712 METTL8Q9H825 291 aaKnown RBP13.33□□□□□ -0.28
SNX13-204ENST00000444712 TRAV24A0A0B4J272 114 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 EEF1E1-BLOC1S5C9J1V9 151 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 SH2D1BO14796 132 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 OR2F2O95006 317 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 CRYAAP02489 173 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 PIGPP57054 158 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 OR2F1Q13607 317 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 ZNF146Q15072 292 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 GFRALQ6UXV0 394 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 CISD2Q8N5K1 135 aaKnown RBP13.32□□□□□ -0.28
SNX13-204ENST00000444712 Q8NA96 180 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 GALNT14Q96FL9 552 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 SEC22AQ96IW7 307 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 ARL6Q9H0F7 186 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 TLNRD1Q9H1K6 362 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 TINAGQ9UJW2 476 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 C13orf42A0A1B0GVH6 325 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 A0A1B0GWJ7 208 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 A8MXE2 369 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 CDIPTO14735 213 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 MLNRO43193 412 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 MPC2O95563 127 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 PPYP01298 95 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 GRPP07492 148 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 PET100P0DJ07 73 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 DUSP1P28562 367 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 FXYD4P59646 89 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 RPS23P62266 143 aaKnown RBP13.32□□□□□ -0.28
SNX13-204ENST00000444712 RBPJQ06330 500 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 ANKRD55Q3KP44 614 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 Q6P435 159 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 ZNF880Q6PDB4 577 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 OR5T2Q8NGG2 359 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 MRPL30Q8TCC3 161 aaKnown RBP13.32□□□□□ -0.28
SNX13-204ENST00000444712 RSRP1Q9BUV0 290 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 SUCNR1Q9BXA5 334 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 NAA60Q9H7X0 242 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 ELOVL5Q9NYP7 299 aa13.32□□□□□ -0.28
SNX13-204ENST00000444712 SVILO95425 2214 aa13.31□□□□□ -0.28
SNX13-204ENST00000444712 TUBAL3A6NHL2 446 aa13.31□□□□□ -0.28
SNX13-204ENST00000444712 M0R1B8 84 aa13.31□□□□□ -0.28
SNX13-204ENST00000444712 HS3ST1O14792 307 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms