RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 FBXW12Q6X9E4 464 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 KMT5CQ86Y97 462 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 CYB561D1Q8N8Q1 229 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 ZFP62Q8NB50 900 aaPredicted RBP7.45□□□□□ -1.22
HPS4-206ENST00000439453 OR8G5Q8NG78 346 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 OR52M1Q8NGK5 317 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 ZCCHC14Q8WYQ9 949 aaKnown RBP7.45□□□□□ -1.22
HPS4-206ENST00000439453 REEP6Q96HR9 211 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 HIST1H2BLQ99880 126 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 NIPSNAP3BQ9BS92 247 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 NAA60Q9H7X0 242 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 ZNF319Q9P2F9 582 aa7.45□□□□□ -1.22
HPS4-206ENST00000439453 FOXD3Q9UJU5 478 aaPredicted RBP7.45□□□□□ -1.22
HPS4-206ENST00000439453 MCTS1Q9ULC4 181 aaKnown RBP7.45□□□□□ -1.22
HPS4-206ENST00000439453 TMEM8BA6NDV4 472 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 H0YIG0 161 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 SCAF4O95104 1147 aaKnown RBP7.44□□□□□ -1.22
HPS4-206ENST00000439453 QDPRP09417 244 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 WT1P19544 449 aaPredicted RBP7.44□□□□□ -1.22
HPS4-206ENST00000439453 DUSP1P28562 367 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 ZNF121P58317 390 aaPredicted RBP7.44□□□□□ -1.22
HPS4-206ENST00000439453 HSF1Q00613 529 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 FOXO1Q12778 655 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 ICAM4Q14773 271 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 C21orf62-AS1Q17RA5 79 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 DPPA2Q7Z7J5 298 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 SLC38A9Q8NBW4 561 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 SSC4DQ8WTU2 575 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 FAM210BQ96KR6 192 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 CRLF2Q9HC73 371 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 DECR2Q9NUI1 292 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 AK3Q9UIJ7 227 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 TSPAN2O60636 221 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 ANOS1P23352 680 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 ATP6V0CP27449 155 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 EWSR1Q01844 656 aaKnown RBP eCLIP7.44□□□□□ -1.22
HPS4-206ENST00000439453 C4orf17Q53FE4 359 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 OR1L3Q8NH93 324 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 TOMM40LQ969M1 308 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 TMEM68Q96MH6 324 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 OR6C1Q96RD1 312 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 HDHD3Q9BSH5 251 aaPredicted RBP7.44□□□□□ -1.22
HPS4-206ENST00000439453 WSB1Q9Y6I7 421 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 C9J4A7 227 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 PHOX2AO14813 284 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 HSPB1P04792 205 aaKnown RBP7.44□□□□□ -1.22
HPS4-206ENST00000439453 ZNF43P17038 809 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 CEACAM6P40199 344 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 ABCA11PQ4W5N1 156 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 H1FNTQ75WM6 255 aaPredicted RBP7.44□□□□□ -1.22
HPS4-206ENST00000439453 C6orf201Q7Z4U5 140 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 SLC35E3Q7Z769 313 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 NPRL2Q8WTW4 380 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 C18orf12Q96KH6 178 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 EMC6Q9BV81 110 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 LIME1Q9H400 295 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 LHFPL6Q9Y693 200 aa7.44□□□□□ -1.22
HPS4-206ENST00000439453 ZNF705GA8MUZ8 300 aaPredicted RBP7.43□□□□□ -1.22
HPS4-206ENST00000439453 A8MWP6 167 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 CA11O75493 328 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 SNRPCP09234 159 aaKnown RBP7.43□□□□□ -1.22
HPS4-206ENST00000439453 ZNF728P0DKX0 622 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 TMEM225BP0DP42 221 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 CSNK1A1P48729 337 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 PLCXD2Q0VAA5 305 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 PPA1Q15181 289 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 KISS1Q15726 138 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 ZNF506Q5JVG8 444 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 TSPO2Q5TGU0 170 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 C1orf87Q8N0U7 546 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 RTN4IP1Q8WWV3 396 aaPredicted RBP7.43□□□□□ -1.22
HPS4-206ENST00000439453 RBM14Q96PK6 669 aaKnown RBP7.43□□□□□ -1.22
HPS4-206ENST00000439453 AKIRIN1Q9H9L7 192 aaPredicted RBP7.43□□□□□ -1.22
HPS4-206ENST00000439453 FAM230AA0A1W2PPH8 454 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 IGKV3-11P04433 115 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 FGF7P21781 194 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 SFTPDP35247 375 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 BIDP55957 195 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 TLE3Q04726 772 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 ZNF266Q14584 549 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 GNMTQ14749 295 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 ARL6IP1Q15041 203 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 OR8G1Q15617 311 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 HLA-DQA1Q5Y7H0 255 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 RTL6Q6ICC9 239 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 LIAT1Q6ZQX7 453 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 DOK3Q7L591 496 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 LRTM2Q8N967 370 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 OR2AJ1Q8NGZ0 328 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 ZNF721Q8TF20 911 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 TSLPQ969D9 159 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 BOD1Q96IK1 185 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 TM2D1Q9BX74 207 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 VN1R1Q9GZP7 353 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 HSF4Q9ULV5 492 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 KALRNO60229 2985 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 A0A087WZY1 265 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 A0A1B0GWJ7 208 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 FAM24AA6NFZ4 105 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 ATXN7O15265 892 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms