RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 OR5T1Q8NG75 326 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 TAF9BQ9HBM6 251 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 HEYLQ9NQ87 328 aaPredicted RBP9.8□□□□□ -0.84
SNX13-202ENST00000409604 RNF7Q9UBF6 113 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 MAP1AP78559 2803 aaPredicted RBP9.8□□□□□ -0.84
SNX13-202ENST00000409604 SOX15O60248 233 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 CATR1Q13166 79 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 GPR157Q5UAW9 335 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 SCGB1C1Q8TD33 95 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 CHPT1Q8WUD6 406 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 MOV10Q9HCE1 1003 aaKnown RBP9.8□□□□□ -0.84
SNX13-202ENST00000409604 SLC17A5Q9NRA2 495 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 IL18BPO95998 194 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 PRAMEF5Q5TYX0 476 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 RAB1CQ92928 201 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 EML6Q6ZMW3 1958 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 ACANP16112 2415 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 IGLV3-32A0A0A0MS00 114 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 A0A0B4J2A0 478 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 IAPPP10997 89 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 DLX5P56178 289 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 ACSM1Q08AH1 577 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 ELP2Q6IA86 826 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 ZNF546Q86UE3 836 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 CADM3Q8N126 398 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 RAB39BQ96DA2 213 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 MRPS24Q96EL2 167 aaKnown RBP9.8□□□□□ -0.84
SNX13-202ENST00000409604 WFIKKN1Q96NZ8 548 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 DDOQ99489 341 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 UQCC2Q9BRT2 126 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 DCTN5Q9BTE1 182 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 PECRQ9BY49 303 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 SIRT7Q9NRC8 400 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 CLN8Q9UBY8 286 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 SHPKQ9UHJ6 478 aa9.8□□□□□ -0.84
SNX13-202ENST00000409604 MYO15AQ9UKN7 3530 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 TMEM30CPA0ZSE6 113 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 J3QT63 122 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 COL8A1P27658 744 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 CD300CQ08708 224 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 C10orf128Q5T292 105 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 OR5A2Q8NGI9 324 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 SPTBN5Q9NRC6 3674 aaKnown RBP9.79□□□□□ -0.84
SNX13-202ENST00000409604 DENND4AQ7Z401 1863 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 IGHV2OR16-5A0A0B4J2B6 119 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 SYNGR3O43761 229 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 YIF1AO95070 293 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 PPP1CCP36873 323 aaKnown RBP9.79□□□□□ -0.84
SNX13-202ENST00000409604 COL10A1Q03692 680 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 ABLIM2Q6H8Q1 611 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 RIMS4Q9H426 269 aaPredicted RBP9.79□□□□□ -0.84
SNX13-202ENST00000409604 PRELID3BQ9Y3B1 194 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 YLPM1P49750 1951 aaKnown RBP9.79□□□□□ -0.84
SNX13-202ENST00000409604 HECTD1Q9ULT8 2610 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 NCOA6Q14686 2063 aaPredicted RBP9.79□□□□□ -0.84
SNX13-202ENST00000409604 HIVEP2P31629 2446 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 TIMM23BQ5SRD1 257 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 HSD17B11Q8NBQ5 300 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 CNTNAP3Q9BZ76 1288 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 ZDHHC11Q9H8X9 412 aa9.79□□□□□ -0.84
SNX13-202ENST00000409604 SF3B6Q9Y3B4 125 aaKnown RBP9.79□□□□□ -0.84
SNX13-202ENST00000409604 A0A1B0GUH1 482 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 FCGR3BO75015 233 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 LILRA1O75019 489 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 GPR6P46095 362 aaPredicted RBP9.78□□□□□ -0.84
SNX13-202ENST00000409604 F2RL1P55085 397 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 ARF6P62330 175 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 IGSF11Q5DX21 431 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 ZNF474Q6S9Z5 364 aaPredicted RBP9.78□□□□□ -0.84
SNX13-202ENST00000409604 SUMF2Q8NBJ7 301 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 TNRC18O15417 2968 aaPredicted RBP9.78□□□□□ -0.84
SNX13-202ENST00000409604 HOXD4P09016 255 aaPredicted RBP9.78□□□□□ -0.84
SNX13-202ENST00000409604 GRNP28799 593 aaKnown RBP9.78□□□□□ -0.84
SNX13-202ENST00000409604 PRDX2P32119 198 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 RPL31P62899 125 aaKnown RBP9.78□□□□□ -0.84
SNX13-202ENST00000409604 H3F3AP84243 136 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 ZNF154Q13106 437 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 HACD4Q5VWC8 232 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 OR4A16Q8NH70 328 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 SULT4A1Q9BR01 284 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 OR2D2Q9H210 308 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 OPA3Q9H6K4 179 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 NSG2Q9Y328 171 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 DOPEY1Q5JWR5 2465 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 PPIAL4EA0A075B759 164 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 PPIAL4DF5H284 164 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 PPIAL4FP0DN26 164 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 H3F3CQ6NXT2 135 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 FBLIM1Q8WUP2 373 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 PPIAL4AQ9Y536 164 aa9.78□□□□□ -0.84
SNX13-202ENST00000409604 ZNF292O60281 2723 aa9.77□□□□□ -0.84
SNX13-202ENST00000409604 SERPINE3A8MV23 424 aa9.77□□□□□ -0.84
SNX13-202ENST00000409604 SHOXO15266 292 aa9.77□□□□□ -0.84
SNX13-202ENST00000409604 ST8SIA5O15466 376 aa9.77□□□□□ -0.84
SNX13-202ENST00000409604 DEFA4P12838 97 aa9.77□□□□□ -0.84
SNX13-202ENST00000409604 CEACAM21Q3KPI0 293 aa9.77□□□□□ -0.84
SNX13-202ENST00000409604 RTL6Q6ICC9 239 aa9.77□□□□□ -0.84
SNX13-202ENST00000409604 MFSD4AQ8N468 514 aa9.77□□□□□ -0.84
SNX13-202ENST00000409604 OR8G5Q8NG78 346 aa9.77□□□□□ -0.84
SNX13-202ENST00000409604 TERB2Q8NHR7 220 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms