RNA–Protein interactions for RNA: ENST00000403076.5

SDC1-203, Transcript of syndecan 1, humanhuman

TSL 1 (best) BASIC

Gene SDC1, Length 1,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-203ENST00000403076 MAB21L2Q9Y586 359 aa15.08■□□□□ 0.01
SDC1-203ENST00000403076 FBN2P35556 2912 aa15.08■□□□□ 0
SDC1-203ENST00000403076 NAV2Q8IVL1 2488 aa15.08■□□□□ 0
SDC1-203ENST00000403076 CEACAM18A8MTB9 384 aa15.07■□□□□ 0
SDC1-203ENST00000403076 MRPS15P82914 257 aaKnown RBP15.07■□□□□ 0
SDC1-203ENST00000403076 CLEC12BQ2HXU8 276 aa15.07■□□□□ 0
SDC1-203ENST00000403076 RTN4RL2Q86UN3 420 aa15.07■□□□□ 0
SDC1-203ENST00000403076 FAM216BQ8N7L0 139 aa15.07■□□□□ 0
SDC1-203ENST00000403076 S100ZQ8WXG8 99 aa15.07■□□□□ 0
SDC1-203ENST00000403076 SNX22Q96L94 193 aa15.07■□□□□ 0
SDC1-203ENST00000403076 SULT4A1Q9BR01 284 aa15.07■□□□□ 0
SDC1-203ENST00000403076 CHST6Q9GZX3 395 aa15.07■□□□□ 0
SDC1-203ENST00000403076 AUNIPQ9H7T9 357 aa15.07■□□□□ 0
SDC1-203ENST00000403076 ING3Q9NXR8 418 aa15.07■□□□□ 0
SDC1-203ENST00000403076 MIOXQ9UGB7 285 aa15.07■□□□□ 0
SDC1-203ENST00000403076 UNC79Q9P2D8 2635 aa15.07■□□□□ 0
SDC1-203ENST00000403076 ANKRD17O75179 2603 aaKnown RBP15.07■□□□□ 0
SDC1-203ENST00000403076 TMEM82A0PJX8 343 aa15.07■□□□□ 0
SDC1-203ENST00000403076 TMEM235A6NFC5 223 aa15.07■□□□□ 0
SDC1-203ENST00000403076 SIGLEC5O15389 551 aa15.07■□□□□ 0
SDC1-203ENST00000403076 NDUFB3O43676 98 aa15.07■□□□□ 0
SDC1-203ENST00000403076 PSPNO60542 156 aa15.07■□□□□ 0
SDC1-203ENST00000403076 GLAP06280 429 aa15.07■□□□□ 0
SDC1-203ENST00000403076 GSTP1P09211 210 aaKnown RBP15.07■□□□□ 0
SDC1-203ENST00000403076 RPS2P15880 293 aaKnown RBP15.07■□□□□ 0
SDC1-203ENST00000403076 NR4A2P43354 598 aa15.07■□□□□ 0
SDC1-203ENST00000403076 PITPNAQ00169 270 aa15.07■□□□□ 0
SDC1-203ENST00000403076 LSAMPQ13449 338 aa15.07■□□□□ 0
SDC1-203ENST00000403076 ARFRP1Q13795 201 aa15.07■□□□□ 0
SDC1-203ENST00000403076 GRK1Q15835 563 aa15.07■□□□□ 0
SDC1-203ENST00000403076 ZNF260Q3ZCT1 412 aa15.07■□□□□ 0
SDC1-203ENST00000403076 OR5D13Q8NGL4 314 aa15.07■□□□□ 0
SDC1-203ENST00000403076 C15orf40Q8WUR7 153 aa15.07■□□□□ 0
SDC1-203ENST00000403076 TSC22D3Q99576 134 aa15.07■□□□□ 0
SDC1-203ENST00000403076 ETAA1Q9NY74 926 aa15.07■□□□□ 0
SDC1-203ENST00000403076 RABL2AQ9UBK7 228 aaPredicted RBP15.07■□□□□ 0
SDC1-203ENST00000403076 RABL2BQ9UNT1 228 aa15.07■□□□□ 0
SDC1-203ENST00000403076 A0A0G2JMP0 313 aa15.06■□□□□ 0
SDC1-203ENST00000403076 A0A0X1KG70 313 aa15.06■□□□□ 0
SDC1-203ENST00000403076 A0A1B0GW55 424 aa15.06■□□□□ 0
SDC1-203ENST00000403076 MFNGO00587 321 aa15.06■□□□□ 0
SDC1-203ENST00000403076 TNFRSF13BO14836 293 aaPredicted RBP15.06■□□□□ 0
SDC1-203ENST00000403076 HLA-DQB1P01920 261 aa15.06■□□□□ 0
SDC1-203ENST00000403076 CD3GP09693 182 aa15.06■□□□□ 0
SDC1-203ENST00000403076 DUX4L2P0CJ85 424 aa15.06■□□□□ 0
SDC1-203ENST00000403076 DUX4L3P0CJ86 424 aa15.06■□□□□ 0
SDC1-203ENST00000403076 DUX4L4P0CJ87 422 aa15.06■□□□□ 0
SDC1-203ENST00000403076 DUX4L5P0CJ88 424 aa15.06■□□□□ 0
SDC1-203ENST00000403076 DUX4L6P0CJ89 424 aa15.06■□□□□ 0
SDC1-203ENST00000403076 DUX4L7P0CJ90 424 aa15.06■□□□□ 0
SDC1-203ENST00000403076 PTHLHP12272 177 aa15.06■□□□□ 0
SDC1-203ENST00000403076 SELLP14151 372 aa15.06■□□□□ 0
SDC1-203ENST00000403076 ETV6P41212 452 aa15.06■□□□□ 0
SDC1-203ENST00000403076 GNG2P59768 71 aa15.06■□□□□ 0
SDC1-203ENST00000403076 ATXN7L3Q14CW9 347 aaPredicted RBP15.06■□□□□ 0
SDC1-203ENST00000403076 OLFML2AQ68BL7 652 aa15.06■□□□□ 0
SDC1-203ENST00000403076 PYHIN1Q6K0P9 492 aa15.06■□□□□ 0
SDC1-203ENST00000403076 DUX4L9Q6RFH8 374 aaPredicted RBP15.06■□□□□ 0
SDC1-203ENST00000403076 C17orf107Q6ZR85 190 aa15.06■□□□□ 0
SDC1-203ENST00000403076 NLRC3Q7RTR2 1065 aa15.06■□□□□ 0
SDC1-203ENST00000403076 OR4S1Q8NGB4 309 aa15.06■□□□□ 0
SDC1-203ENST00000403076 OR4M2Q8NGB6 313 aa15.06■□□□□ 0
SDC1-203ENST00000403076 KAAG1Q9UBP8 84 aa15.06■□□□□ 0
SDC1-203ENST00000403076 DUX4Q9UBX2 424 aa15.06■□□□□ 0
SDC1-203ENST00000403076 TACC2O95359 2948 aa15.06■□□□□ 0
SDC1-203ENST00000403076 SERPINE3A8MV23 424 aa15.05■□□□□ -0
SDC1-203ENST00000403076 K7N7A8 449 aa15.05■□□□□ -0
SDC1-203ENST00000403076 ZNF737O75373 536 aa15.05■□□□□ -0
SDC1-203ENST00000403076 TPPPO94811 219 aa15.05■□□□□ -0
SDC1-203ENST00000403076 TK1P04183 234 aa15.05■□□□□ -0
SDC1-203ENST00000403076 NDUFB7P17568 137 aa15.05■□□□□ -0
SDC1-203ENST00000403076 PRSS3P35030 304 aa15.05■□□□□ -0
SDC1-203ENST00000403076 OR3A1P47881 315 aa15.05■□□□□ -0
SDC1-203ENST00000403076 ZNF45Q02386 682 aa15.05■□□□□ -0
SDC1-203ENST00000403076 PYDC2Q56P42 97 aa15.05■□□□□ -0
SDC1-203ENST00000403076 LRRC10Q5BKY1 277 aa15.05■□□□□ -0
SDC1-203ENST00000403076 Q5PR19 223 aa15.05■□□□□ -0
SDC1-203ENST00000403076 GDPD3Q7L5L3 318 aa15.05■□□□□ -0
SDC1-203ENST00000403076 OR8B3Q8NGG8 313 aa15.05■□□□□ -0
SDC1-203ENST00000403076 DYRK2Q92630 601 aa15.05■□□□□ -0
SDC1-203ENST00000403076 CYYR1Q96J86 154 aa15.05■□□□□ -0
SDC1-203ENST00000403076 OR8B2Q96RD0 313 aa15.05■□□□□ -0
SDC1-203ENST00000403076 ABHD1Q96SE0 405 aa15.05■□□□□ -0
SDC1-203ENST00000403076 CMSS1Q9BQ75 279 aaKnown RBP15.05■□□□□ -0
SDC1-203ENST00000403076 FAM234AQ9H0X4 552 aa15.05■□□□□ -0
SDC1-203ENST00000403076 PATZ1Q9HBE1 687 aaKnown RBP15.05■□□□□ -0
SDC1-203ENST00000403076 CHMP1AQ9HD42 196 aaPredicted RBP15.05■□□□□ -0
SDC1-203ENST00000403076 SLC25A10Q9UBX3 287 aaPredicted RBP15.05■□□□□ -0
SDC1-203ENST00000403076 AK3Q9UIJ7 227 aa15.05■□□□□ -0
SDC1-203ENST00000403076 ELF5Q9UKW6 265 aaPredicted RBP15.05■□□□□ -0
SDC1-203ENST00000403076 KCNK7Q9Y2U2 307 aa15.05■□□□□ -0
SDC1-203ENST00000403076 V9GYH0 126 aa15.05■□□□□ -0
SDC1-203ENST00000403076 IGHV4-30-2A0A087WSY4 118 aa15.04■□□□□ -0
SDC1-203ENST00000403076 MGST3O14880 152 aa15.04■□□□□ -0
SDC1-203ENST00000403076 PTBP1P26599 531 aaKnown RBP eCLIP15.04■□□□□ -0
SDC1-203ENST00000403076 KCNJ3P48549 501 aa15.04■□□□□ -0
SDC1-203ENST00000403076 EDDM3AQ14507 147 aa15.04■□□□□ -0
SDC1-203ENST00000403076 PNLIPRP3Q17RR3 467 aa15.04■□□□□ -0
SDC1-203ENST00000403076 RNASE12Q5GAN4 147 aaKnown RBP15.04■□□□□ -0
SDC1-203ENST00000403076 HACD4Q5VWC8 232 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms