RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 DIDO1Q9BTC0 2240 aaKnown RBP8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 SHISA7A6NL88 538 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 IFNA10P01566 189 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 PATE4P0C8F1 98 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 NKX2-1P43699 371 aaPredicted RBP8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 CLDN17P56750 224 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 GPR157Q5UAW9 335 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 MYPOPQ86VE0 399 aaPredicted RBP8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 C1QL4Q86Z23 238 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 ZNF695Q8IW36 515 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 DDIT4LQ96D03 193 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 HIST1H2BLQ99880 126 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 CABLES2Q9BTV7 478 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 LRRC61Q9BV99 259 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 NKX2-4Q9H2Z4 354 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 PLEK2Q9NYT0 353 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 ARHGAP21Q5T5U3 1957 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 ZNF407Q9C0G0 2248 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 NCOA6Q14686 2063 aaPredicted RBP8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 MSTNO14793 375 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 HSPA12AO43301 675 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 CD55P08174 381 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 IFI6P09912 130 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 CD200P41217 278 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 TAS2R60P59551 318 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 RPS18P62269 152 aaKnown RBP8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 ICAM4Q14773 271 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 PRAMEF20Q5VT98 475 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 FBXL14Q8N1E6 418 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 LFNGQ8NES3 379 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 ZNF442Q9H7R0 627 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 NECAP2Q9NVZ3 263 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 CA14Q9ULX7 337 aa8.58□□□□□ -1.04
PTCHD4-202ENST00000398738 FRYQ5TBA9 3013 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 LIPT2A6NK58 231 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 PTBP3O95758 552 aaKnown RBP8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 FBLP22087 321 aaKnown RBP8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 HLA-DRB3P79483 266 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 TMEM37Q8WXS4 190 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 MVB12AQ96EY5 273 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 ZNF665Q9H7R5 613 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 SDHAF3Q9NRP4 125 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 B3GAT1Q9P2W7 334 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 PCDH15Q96QU1 1955 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 ADAM20O43506 726 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 OR7C1O76099 320 aaPredicted RBP8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 AADACP22760 399 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 RABIFP47224 123 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 CAPZBP47756 277 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 ZNF41P51814 821 aaPredicted RBP8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 ERVS71-1P61550 626 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 ADIRFQ15847 76 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 THEM4Q5T1C6 240 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 C1orf87Q8N0U7 546 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 FAM89BQ8N5H3 189 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 OR1N1Q8NGS0 311 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 CPNE4Q96A23 557 aaPredicted RBP8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 BOD1Q96IK1 185 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 YPEL4Q96NS1 127 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 TPSD1Q9BZJ3 242 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 GLRX2Q9NS18 164 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 P4HTMQ9NXG6 502 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 FBLN5Q9UBX5 448 aa8.57□□□□□ -1.04
PTCHD4-202ENST00000398738 SPTY2D1-AS1A0A0U1RR47 76 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 ARGFXA6NJG6 315 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 G3V3Y1 287 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 IGHMP01871 453 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 YPEL5P62699 121 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 ZNF266Q14584 549 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 RSG1Q9BU20 258 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 ARV1Q9H2C2 271 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 ANAPC10Q9UM13 185 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 PGA3P0DJD8 388 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 GLB1P16278 677 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 GLIPR1P48060 266 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 RNF4P78317 190 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 TMEM267Q0VDI3 215 aaPredicted RBP8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 FAM189A2Q15884 450 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 TMEM240Q5SV17 173 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 RTL10Q7L3V2 364 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 TMEM252Q8N6L7 170 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 NOXO1Q8NFA2 376 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 SYT3Q9BQG1 590 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 SLC25A31Q9H0C2 315 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 METTL7AQ9H8H3 244 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 CALHM2Q9HA72 323 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 PLA2G3Q9NZ20 509 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 CEBPZOSA8MTT3 80 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 C17orf67Q0P5P2 114 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 SNAI3Q3KNW1 292 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 ZNF664Q8N3J9 261 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 NEK7Q8TDX7 302 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 MSI2Q96DH6 328 aaKnown RBP8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 GABRG3Q99928 467 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 LAMP3Q9UQV4 416 aa8.56□□□□□ -1.04
PTCHD4-202ENST00000398738 RALGAPA1Q6GYQ0 2036 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 PROB1E7EW31 1015 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 CHST1O43916 411 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 GABRG2P18507 467 aa8.55□□□□□ -1.04
PTCHD4-202ENST00000398738 TNFRSF4P43489 277 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms