RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 HEXAP06865 529 aa12.63□□□□□ -0.39
SMTN-202ENST00000347557 DANCRP0C864 163 aa12.63□□□□□ -0.39
SMTN-202ENST00000347557 SRYQ05066 204 aa12.63□□□□□ -0.39
SMTN-202ENST00000347557 C15orf54Q8N8G6 183 aa12.63□□□□□ -0.39
SMTN-202ENST00000347557 ZDHHC8Q9ULC8 765 aa12.63□□□□□ -0.39
SMTN-202ENST00000347557 ATXN7O15265 892 aaPredicted RBP12.62□□□□□ -0.39
SMTN-202ENST00000347557 GNRHRP30968 328 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 DSCR4P56555 118 aaPredicted RBP12.62□□□□□ -0.39
SMTN-202ENST00000347557 FAM27BQ5VT28 67 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 NSUN5P2Q63ZY6 315 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 ZNF695Q8IW36 515 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 RNF138Q8WVD3 245 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 SPSB1Q96BD6 273 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 MISP3Q96FF7 219 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 METTL1Q9UBP6 276 aaKnown RBP12.62□□□□□ -0.39
SMTN-202ENST00000347557 TIMM10BQ9Y5J6 103 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 MMP24Q9Y5R2 645 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 ZNF407Q9C0G0 2248 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 A0A096LPE4 126 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 A0A1W2PPZ6 126 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 FAM157AC9JC47 383 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 VAMP5O95183 116 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 SLC34A2O95436 690 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 IGLV3-1P01715 115 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 TCN2P20062 427 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 EPHA1P21709 976 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 P2RY1P47900 373 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 CXCL12P48061 93 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 STARD6P59095 220 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 RPS18P62269 152 aaKnown RBP12.62□□□□□ -0.39
SMTN-202ENST00000347557 CCL20P78556 96 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 ZNF385CQ66K41 422 aaPredicted RBP12.62□□□□□ -0.39
SMTN-202ENST00000347557 CALHM1Q8IU99 346 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 DOCK7Q96N67 2140 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 HSD17B6O14756 317 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 RRP8O43159 456 aaKnown RBP12.62□□□□□ -0.39
SMTN-202ENST00000347557 SULT1A1P50225 295 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 VAMP2P63027 116 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 PSG4Q00888 419 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 SOHLH1Q5JUK2 328 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 WIPI1Q5MNZ9 446 aaPredicted RBP12.62□□□□□ -0.39
SMTN-202ENST00000347557 NCMAPQ5T1S8 102 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 SUMF2Q8NBJ7 301 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 DNASE2BQ8WZ79 361 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 OR51B6Q9H340 312 aa12.62□□□□□ -0.39
SMTN-202ENST00000347557 COL5A1P20908 1838 aaPredicted RBP12.61□□□□□ -0.39
SMTN-202ENST00000347557 ZNF727A8MUV8 499 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 H3BP45 60 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 MT-ND4LP03901 98 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 OTX2P32243 289 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 GNG10P50151 68 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 MRPS34P82930 218 aaKnown RBP12.61□□□□□ -0.39
SMTN-202ENST00000347557 RAB35Q15286 201 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 CXorf66Q5JRM2 361 aaPredicted RBP12.61□□□□□ -0.39
SMTN-202ENST00000347557 SLC23A3Q6PIS1 610 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 DTD1Q8TEA8 209 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 NAT6Q93015 286 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 C2orf88Q9BSF0 95 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 SUCNR1Q9BXA5 334 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 STARD10Q9Y365 291 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 EXPH5Q8NEV8 1989 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 SEC11BP0C7V7 166 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 RAB5AP20339 215 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 EPHA8P29322 1005 aaPredicted RBP12.61□□□□□ -0.39
SMTN-202ENST00000347557 OTX1P32242 354 aaPredicted RBP12.61□□□□□ -0.39
SMTN-202ENST00000347557 RPS10P46783 165 aaKnown RBP12.61□□□□□ -0.39
SMTN-202ENST00000347557 EWSR1Q01844 656 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMTN-202ENST00000347557 ZNF561Q8N587 486 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 ZNF611Q8N823 705 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 ZPBPQ9BS86 351 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 PBDC1Q9BVG4 233 aa12.61□□□□□ -0.39
SMTN-202ENST00000347557 C3orf85A0A1B0GTC6 90 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 LOC102725191A0A1B0GVB3 256 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 C9J4A7 227 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 ZNF587BE7ETH6 402 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 SYNGR3O43761 229 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 NKX2-1P43699 371 aaPredicted RBP12.6□□□□□ -0.39
SMTN-202ENST00000347557 RUNX1Q01196 453 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 MSI2Q96DH6 328 aaKnown RBP12.6□□□□□ -0.39
SMTN-202ENST00000347557 SLC7A10Q9NS82 523 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 BTBD17A6NE02 478 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 TOX3O15405 576 aaPredicted RBP12.6□□□□□ -0.39
SMTN-202ENST00000347557 PPYP01298 95 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 UMODP07911 640 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 RFPL3SP0C7P2 107 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 HNF4GQ14541 408 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 HLA-BQ31612 363 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 MRPL14Q6P1L8 145 aaKnown RBP12.6□□□□□ -0.39
SMTN-202ENST00000347557 UNQ6494/PRO21346Q6UXR6 183 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 LHFPL2Q6ZUX7 228 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 OR2C3Q8N628 320 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 ABHD3Q8WU67 409 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 ZNF845Q96IR2 970 aaPredicted RBP12.6□□□□□ -0.39
SMTN-202ENST00000347557 FOXB1Q99853 325 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 SLC35B3Q9H1N7 401 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 PCED1AQ9H1Q7 454 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 PROK2Q9HC23 129 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 IL36RNQ9UBH0 155 aa12.6□□□□□ -0.39
SMTN-202ENST00000347557 FOXD3Q9UJU5 478 aaPredicted RBP12.6□□□□□ -0.39
SMTN-202ENST00000347557 HS3ST3B1Q9Y662 390 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms