RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SDCBPO00560 298 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 IGHV1-46P01743 117 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 HPXP02790 462 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 MDH2P40926 338 aaKnown RBP18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 SMIM21Q3B7S5 101 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 Q6ZS49 121 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 ITLN1Q8WWA0 313 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 DIRC2Q96SL1 478 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 IL19Q9UHD0 177 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 VSIG4Q9Y279 399 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 TUBAL3A6NHL2 446 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 SLC33A1O00400 549 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 WNT9BO14905 357 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 SSNA1O43805 119 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 CREBL2O60519 120 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 HAND1O96004 215 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 KNG1P01042 644 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 GNLYP22749 145 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 GATA4P43694 442 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 TNFAIP6P98066 277 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 PAN3Q58A45 887 aaKnown RBP18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 BEX5Q5H9J7 111 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 SHEQ5VZ18 495 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 ZNF626Q68DY1 528 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 LHFPL1Q86WI0 220 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 DMRTC2Q8IXT2 367 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 SCGB3A2Q96PL1 93 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 Q9N2K0 584 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 TREM2Q9NZC2 230 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 PKD1L2Q7Z442 2459 aa18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 CHD3Q12873 2000 aaKnown RBP18.12■□□□□ 0.49
TSPAN3-202ENST00000346495 TRBV6-6A0A0A6YYG2 114 aa18.11■□□□□ 0.49
TSPAN3-202ENST00000346495 SIRPB1O00241 398 aa18.11■□□□□ 0.49
TSPAN3-202ENST00000346495 FCN2Q15485 313 aa18.11■□□□□ 0.49
TSPAN3-202ENST00000346495 TMED4Q7Z7H5 227 aa18.11■□□□□ 0.49
TSPAN3-202ENST00000346495 WDR13Q9H1Z4 485 aa18.11■□□□□ 0.49
TSPAN3-202ENST00000346495 ING3Q9NXR8 418 aa18.11■□□□□ 0.49
TSPAN3-202ENST00000346495 ITPR1Q14643 2758 aa18.11■□□□□ 0.49
TSPAN3-202ENST00000346495 POM121CA8CG34 1229 aa18.1■□□□□ 0.49
TSPAN3-202ENST00000346495 CEACAM18A8MTB9 384 aa18.1■□□□□ 0.49
TSPAN3-202ENST00000346495 A8MV72 311 aaPredicted RBP18.1■□□□□ 0.49
TSPAN3-202ENST00000346495 H7C1Q1 480 aa18.1■□□□□ 0.49
TSPAN3-202ENST00000346495 ADH4P08319 380 aa18.1■□□□□ 0.49
TSPAN3-202ENST00000346495 CD83Q01151 205 aa18.1■□□□□ 0.49
TSPAN3-202ENST00000346495 TFF3Q07654 80 aa18.1■□□□□ 0.49
TSPAN3-202ENST00000346495 Q6ZPA2 131 aa18.1■□□□□ 0.49
TSPAN3-202ENST00000346495 MOGAT3Q86VF5 341 aa18.1■□□□□ 0.49
TSPAN3-202ENST00000346495 ZNF808Q8N4W9 903 aaPredicted RBP18.1■□□□□ 0.49
TSPAN3-202ENST00000346495 ZNF69Q9UC07 566 aa18.1■□□□□ 0.49
TSPAN3-202ENST00000346495 OR14J1Q9UGF5 321 aa18.1■□□□□ 0.49
TSPAN3-202ENST00000346495 SRRM5B3KS81 715 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 E7EQL1 145 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 OR5H8P0DN80 308 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 LMO1P25800 156 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 SERPINF1P36955 418 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 ECI1P42126 302 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 UQCRFS1P47985 274 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 C4orf46Q504U0 113 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 FAM90A1Q86YD7 464 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 MRPL30Q8TCC3 161 aaKnown RBP18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 MARCH1Q8TCQ1 289 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 ERGIC1Q969X5 290 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 RANGRFQ9HD47 186 aaPredicted RBP18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 RNF115Q9Y4L5 304 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 KIR2DS1A0A191URI9 304 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 CD55P08174 381 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 OR4E1P0C645 316 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 AGAP20933 346 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 FPR2P25090 351 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 KIR2DS4P43632 304 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 EIF2B2P49770 351 aaKnown RBP18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 TLE1Q04724 770 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 KIR2DS1Q14954 304 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 SPRNQ5BIV9 151 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 SLC25A42Q86VD7 318 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 TMEM165Q9HC07 324 aa18.09■□□□□ 0.49
TSPAN3-202ENST00000346495 COL6A6A6NMZ7 2263 aa18.08■□□□□ 0.49
TSPAN3-202ENST00000346495 HCFC1P51610 2035 aa18.08■□□□□ 0.49
TSPAN3-202ENST00000346495 C17orf100A8MU93 164 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 IFNL4K9M1U5 179 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 GSTT2P0CG29 244 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 SULT1A3P0DMM9 295 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 SULT1A4P0DMN0 295 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 NPY4RP50391 375 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 TAS2R31P59538 309 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 SURF2Q15527 256 aaPredicted RBP18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 AADACL3Q5VUY0 350 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 ZNF880Q6PDB4 577 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 DHRS11Q6UWP2 260 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 OR11H7Q8NGC8 314 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 OR52B4Q8NGK2 314 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 ZNF431Q8TF32 576 aaPredicted RBP18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 CAPSLQ8WWF8 208 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 ZNF2Q9BSG1 426 aaPredicted RBP18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 GPR132Q9UNW8 380 aa18.08■□□□□ 0.48
TSPAN3-202ENST00000346495 TRDCB7Z8K6 153 aa18.07■□□□□ 0.48
TSPAN3-202ENST00000346495 M0R233 179 aa18.07■□□□□ 0.48
TSPAN3-202ENST00000346495 CLDN14O95500 239 aa18.07■□□□□ 0.48
TSPAN3-202ENST00000346495 APOBEC3AP31941 199 aaPredicted RBP18.07■□□□□ 0.48
TSPAN3-202ENST00000346495 ZNF660Q6AZW8 331 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms