RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 PATE3B3GLJ2 98 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 PGA3P0DJD8 388 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 FUT3P21217 361 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 NKX2-1P43699 371 aaPredicted RBP10.28□□□□□ -0.76
RBM39-202ENST00000338163 BLKP51451 505 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 ZNF41P51814 821 aaPredicted RBP10.28□□□□□ -0.76
RBM39-202ENST00000338163 CASP6P55212 293 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 HERV-K104P61576 105 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 HLA-DRB3P79483 266 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 SPIN3Q5JUX0 258 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 CMTM1Q8IZ96 169 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 SNIP1Q8TAD8 396 aaKnown RBP10.28□□□□□ -0.76
RBM39-202ENST00000338163 SYT3Q9BQG1 590 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 GPR27Q9NS67 375 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 WASF3Q9UPY6 502 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 ZNF318Q5VUA4 2279 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 A0A087WWC5 75 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 H3BP45 60 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 IFNA10P01566 189 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 FBLP22087 321 aaKnown RBP10.28□□□□□ -0.76
RBM39-202ENST00000338163 LMO1P25800 156 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 ZNF133P52736 654 aaPredicted RBP10.28□□□□□ -0.76
RBM39-202ENST00000338163 TLE1Q04724 770 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 C17orf67Q0P5P2 114 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 OR8G1Q15617 311 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 CRIP3Q6Q6R5 217 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 LMX1AQ8TE12 382 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 ST8SIA1Q92185 356 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 MSI2Q96DH6 328 aaKnown RBP10.28□□□□□ -0.76
RBM39-202ENST00000338163 SLC25A31Q9H0C2 315 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 SMDT1Q9H4I9 107 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 HSF4Q9ULV5 492 aa10.28□□□□□ -0.76
RBM39-202ENST00000338163 PI4KAP42356 2102 aa10.27□□□□□ -0.76
RBM39-202ENST00000338163 ZNF814B7Z6K7 855 aa10.27□□□□□ -0.76
RBM39-202ENST00000338163 CD200P41217 278 aa10.27□□□□□ -0.76
RBM39-202ENST00000338163 DYNLT3P51808 116 aa10.27□□□□□ -0.76
RBM39-202ENST00000338163 MPV17LQ2QL34 196 aa10.27□□□□□ -0.76
RBM39-202ENST00000338163 CXorf66Q5JRM2 361 aaPredicted RBP10.27□□□□□ -0.76
RBM39-202ENST00000338163 M1APQ8TC57 530 aa10.27□□□□□ -0.76
RBM39-202ENST00000338163 MVB12AQ96EY5 273 aa10.27□□□□□ -0.76
RBM39-202ENST00000338163 C18orf12Q96KH6 178 aa10.27□□□□□ -0.76
RBM39-202ENST00000338163 PNRC2Q9NPJ4 139 aaKnown RBP10.27□□□□□ -0.76
RBM39-202ENST00000338163 UBE2J1Q9Y385 318 aaPredicted RBP10.27□□□□□ -0.76
RBM39-202ENST00000338163 TMEM131Q92545 1883 aa10.27□□□□□ -0.76
RBM39-202ENST00000338163 A0A1B0GW64 132 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 ANKUB1A6NFN9 424 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 TCAPO15273 167 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 RRP8O43159 456 aaKnown RBP10.27□□□□□ -0.77
RBM39-202ENST00000338163 EFNA2O43921 213 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 DHRS3O75911 302 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 CLEC12BQ2HXU8 276 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 PIGYQ3MUY2 71 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 NKAIN1Q4KMZ8 207 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 RTL6Q6ICC9 239 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 NECAP1Q8NC96 275 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 OR2AE1Q8NHA4 323 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 SSC4DQ8WTU2 575 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 CABLES2Q9BTV7 478 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 SIRT7Q9NRC8 400 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 LRFN1Q9P244 771 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 RIF1Q5UIP0 2472 aaKnown RBP10.27□□□□□ -0.77
RBM39-202ENST00000338163 UNC13CQ8NB66 2214 aa10.27□□□□□ -0.77
RBM39-202ENST00000338163 HSPB1P04792 205 aaKnown RBP10.26□□□□□ -0.77
RBM39-202ENST00000338163 MMP9P14780 707 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 EPHA1P21709 976 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 G0S2P27469 103 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 GRB2P62993 217 aaKnown RBP10.26□□□□□ -0.77
RBM39-202ENST00000338163 RNF4P78317 190 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 ZNF154Q13106 437 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 ZNF695Q8IW36 515 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 Q96M66 194 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 ATG101Q9BSB4 218 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 TM2D1Q9BX74 207 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 GLRX2Q9NS18 164 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 KLHL13Q9P2N7 655 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 HLA-HP01893 362 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 BTF3P20290 206 aaKnown RBP10.26□□□□□ -0.77
RBM39-202ENST00000338163 CCL1P22362 96 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 HNRNPKP61978 463 aaKnown RBP eCLIP10.26□□□□□ -0.77
RBM39-202ENST00000338163 TLE4Q04727 773 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 TRIM61Q5EBN2 209 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 SLC35E3Q7Z769 313 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 TMEM252Q8N6L7 170 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 LRFN3Q9BTN0 628 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 ARRDC1-AS1Q9H2J1 176 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 GAB2Q9UQC2 676 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 NCOA6Q14686 2063 aaPredicted RBP10.26□□□□□ -0.77
RBM39-202ENST00000338163 CLDN34H7C241 214 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 TRAF3IP2O43734 574 aaPredicted RBP10.26□□□□□ -0.77
RBM39-202ENST00000338163 OR2J2O76002 312 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 AADACP22760 399 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 ALDH3B1P43353 468 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 FGF8P55075 233 aaPredicted RBP10.26□□□□□ -0.77
RBM39-202ENST00000338163 CLDN17P56750 224 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 DEFB133Q30KQ1 61 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 WDR25Q64LD2 544 aaPredicted RBP10.26□□□□□ -0.77
RBM39-202ENST00000338163 LCN15Q6UWW0 184 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 OR13D1Q8NGV5 346 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 CLDND2Q8NHS1 167 aa10.26□□□□□ -0.77
RBM39-202ENST00000338163 GPR87Q9BY21 358 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms