RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 DMBX1Q8NFW5 382 aa11.82□□□□□ -0.52
ATG4C-201ENST00000317868 OR52M1Q8NGK5 317 aa11.82□□□□□ -0.52
ATG4C-201ENST00000317868 OR5L1Q8NGL2 311 aa11.82□□□□□ -0.52
ATG4C-201ENST00000317868 APH1AQ96BI3 265 aa11.82□□□□□ -0.52
ATG4C-201ENST00000317868 NARS2Q96I59 477 aaKnown RBP11.82□□□□□ -0.52
ATG4C-201ENST00000317868 TMEM56Q96MV1 263 aa11.82□□□□□ -0.52
ATG4C-201ENST00000317868 TSNAXQ99598 290 aaKnown RBP11.82□□□□□ -0.52
ATG4C-201ENST00000317868 TLNRD1Q9H1K6 362 aa11.82□□□□□ -0.52
ATG4C-201ENST00000317868 ZNF442Q9H7R0 627 aa11.82□□□□□ -0.52
ATG4C-201ENST00000317868 ZFP57Q9NU63 452 aa11.82□□□□□ -0.52
ATG4C-201ENST00000317868 LSM5Q9Y4Y9 91 aaKnown RBP11.82□□□□□ -0.52
ATG4C-201ENST00000317868 TMEM56-RWDD3S4R434 201 aa11.82□□□□□ -0.52
ATG4C-201ENST00000317868 TRBV6-6A0A0A6YYG2 114 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 SP1P08047 785 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 CCL2P13500 99 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 MUC1P15941 1255 aaPredicted RBP11.81□□□□□ -0.52
ATG4C-201ENST00000317868 GPR157Q5UAW9 335 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 DHRS7BQ6IAN0 325 aaPredicted RBP11.81□□□□□ -0.52
ATG4C-201ENST00000317868 OR5A2Q8NGI9 324 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 BSCL2Q96G97 398 aaPredicted RBP11.81□□□□□ -0.52
ATG4C-201ENST00000317868 GINS3Q9BRX5 216 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 RHOFQ9HBH0 211 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 PLA2G3Q9NZ20 509 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 LHX6Q9UPM6 363 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 POMT1Q9Y6A1 747 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 GPR137BO60478 399 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 HAAOP46952 286 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 GPM6AP51674 278 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 C9orf135Q5VTT2 229 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 NUFIP2Q7Z417 695 aaKnown RBP11.81□□□□□ -0.52
ATG4C-201ENST00000317868 ZFP62Q8NB50 900 aaPredicted RBP11.81□□□□□ -0.52
ATG4C-201ENST00000317868 OR5P3Q8WZ94 311 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 ZNF552Q9H707 407 aaPredicted RBP11.81□□□□□ -0.52
ATG4C-201ENST00000317868 WFDC1Q9HC57 220 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 FAM86C1Q9NVL1 165 aa11.81□□□□□ -0.52
ATG4C-201ENST00000317868 CLEC18AA5D8T8 446 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 MPPED1O15442 326 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 MT-CO3P00414 261 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 NGFP01138 241 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 ITGA3P26006 1051 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 MEOX1P50221 254 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 BLOC1S1P78537 153 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 FAM122CQ6P4D5 195 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 ZNF880Q6PDB4 577 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 MRPL21Q7Z2W9 205 aaKnown RBP11.8□□□□□ -0.52
ATG4C-201ENST00000317868 SLC35G3Q8N808 338 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 CLEC18CQ8NCF0 446 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 IP6K3Q96PC2 410 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 TMEM222Q9H0R3 208 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 GP6Q9HCN6 339 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 RCL1Q9Y2P8 373 aaKnown RBP11.8□□□□□ -0.52
ATG4C-201ENST00000317868 C3orf85A0A1B0GTC6 90 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 MED6O75586 246 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 WNT5AP41221 380 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 HERV-K104P61576 105 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 RAB1AP62820 205 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 TMEM164Q5U3C3 297 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 MKXQ8IYA7 352 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 SCRT1Q9BWW7 348 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 IFT22Q9H7X7 185 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 IL36RNQ9UBH0 155 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 IL17BQ9UHF5 180 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 KLF13Q9Y2Y9 288 aaPredicted RBP11.8□□□□□ -0.52
ATG4C-201ENST00000317868 LIPGQ9Y5X9 500 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 ZNF732B4DXR9 585 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 TRDCB7Z8K6 153 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 CDS2O95674 445 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 IL18BPO95998 194 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 SEC11BP0C7V7 166 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 SPP1P10451 314 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 F2RL1P55085 397 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 SRPXP78539 464 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 DPPA2Q7Z7J5 298 aa11.8□□□□□ -0.52
ATG4C-201ENST00000317868 IGKV1-6A0A0C4DH72 117 aa11.79□□□□□ -0.52
ATG4C-201ENST00000317868 PHF1O43189 567 aaPredicted RBP11.79□□□□□ -0.52
ATG4C-201ENST00000317868 FBXO24O75426 580 aa11.79□□□□□ -0.52
ATG4C-201ENST00000317868 OR1K1Q8NGR3 316 aa11.79□□□□□ -0.52
ATG4C-201ENST00000317868 HRH4Q9H3N8 390 aa11.79□□□□□ -0.52
ATG4C-201ENST00000317868 ATP23Q9Y6H3 246 aa11.79□□□□□ -0.52
ATG4C-201ENST00000317868 CD300LBA8K4G0 201 aa11.79□□□□□ -0.52
ATG4C-201ENST00000317868 F8W036 122 aa11.79□□□□□ -0.52
ATG4C-201ENST00000317868 M0R296 226 aa11.79□□□□□ -0.52
ATG4C-201ENST00000317868 WNT2P09544 360 aa11.79□□□□□ -0.52
ATG4C-201ENST00000317868 HFEQ30201 348 aa11.79□□□□□ -0.52
ATG4C-201ENST00000317868 LINC00696Q6ZRV3 163 aa11.79□□□□□ -0.52
ATG4C-201ENST00000317868 BATF2Q8N1L9 274 aa11.79□□□□□ -0.52
ATG4C-201ENST00000317868 DUXBA0A1W2PPF3 345 aa11.78□□□□□ -0.52
ATG4C-201ENST00000317868 SLC22A20A6NK97 555 aa11.78□□□□□ -0.52
ATG4C-201ENST00000317868 ST8SIA3O43173 380 aa11.78□□□□□ -0.52
ATG4C-201ENST00000317868 ZNHIT1O43257 154 aa11.78□□□□□ -0.52
ATG4C-201ENST00000317868 SYNGR1O43759 233 aa11.78□□□□□ -0.52
ATG4C-201ENST00000317868 SCGB1D2O95969 90 aa11.78□□□□□ -0.52
ATG4C-201ENST00000317868 SCTP09683 121 aa11.78□□□□□ -0.52
ATG4C-201ENST00000317868 DANCRP0C864 163 aa11.78□□□□□ -0.52
ATG4C-201ENST00000317868 ZNF818PQ6ZRF7 136 aa11.78□□□□□ -0.52
ATG4C-201ENST00000317868 LILRB1Q8NHL6 650 aaPredicted RBP11.78□□□□□ -0.52
ATG4C-201ENST00000317868 MRPL30Q8TCC3 161 aaKnown RBP11.78□□□□□ -0.52
ATG4C-201ENST00000317868 BCL2L2Q92843 193 aaPredicted RBP11.78□□□□□ -0.52
ATG4C-201ENST00000317868 ABHD14BQ96IU4 210 aa11.78□□□□□ -0.52
ATG4C-201ENST00000317868 PLK3Q9H4B4 646 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms