RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 PHF7Q9BWX1 381 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-201ENST00000226574 SLC7A10Q9NS82 523 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 FZR1Q9UM11 496 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 LOC285556D6RIA3 1793 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 COL6A6A6NMZ7 2263 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 SCN5AQ14524 2016 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 RNF222A6NCQ9 220 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 CTSDP07339 412 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-201ENST00000226574 FBP1P09467 338 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 OR10D3Q8NH80 312 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 TMPRSS5Q9H3S3 457 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 GPR27Q9NS67 375 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 IGHV3-43A0A0B4J1X8 118 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 PIGBOS1A0A0B4J2F0 54 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 A0A1W2PNV4 684 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 PPYP01298 95 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 IGHV3-43DP0DP04 118 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 GLULP15104 373 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 DLK1P80370 383 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 LIAT1Q6ZQX7 453 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 VWCEQ96DN2 955 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 EDEM2Q9BV94 578 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 SH3BGRL3Q9H299 93 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 LHFPL6Q9Y693 200 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 SIP14410 1827 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 H3BQ15 152 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 RHBDD2Q6NTF9 364 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 CXorf66Q5JRM2 361 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-201ENST00000226574 CDCP2Q5VXM1 449 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 ZNF574Q6ZN55 896 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-201ENST00000226574 C15orf54Q8N8G6 183 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 MARVELD3Q96A59 401 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 G6PC2Q9NQR9 355 aa12.04□□□□□ -0.48
NFKB1-201ENST00000226574 EPOPA6NHQ4 379 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 TSPAN2O60636 221 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 CD1AP06126 327 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 CALCRP30988 508 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 DSCR4P56555 118 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-201ENST00000226574 EWSR1Q01844 656 aaKnown RBP eCLIP12.03□□□□□ -0.48
NFKB1-201ENST00000226574 SMAD4Q13485 552 aaKnown RBP12.03□□□□□ -0.48
NFKB1-201ENST00000226574 LY6G6FQ5SQ64 297 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 C1orf53Q5VUE5 145 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 CA5BP1Q8WTZ4 195 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 RARRES2Q99969 163 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 LHX6Q9UPM6 363 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 TCF20Q9UGU0 1960 aaKnown RBP12.03□□□□□ -0.48
NFKB1-201ENST00000226574 H0YL77 283 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 MPPED1O15442 326 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 LYPD3O95274 346 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 PRDX4Q13162 271 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 FAM209BQ5JX69 171 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 SPINK14Q6IE38 97 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 CYB561D1Q8N8Q1 229 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 ZNF439Q8NDP4 499 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 PPP1R35Q8TAP8 253 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 AKIRIN1Q9H9L7 192 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-201ENST00000226574 RCC2Q9P258 522 aaKnown RBP12.03□□□□□ -0.48
NFKB1-201ENST00000226574 AQP7P3A6NL99 342 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 CLDN34H7C241 214 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 DNASE2O00115 360 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-201ENST00000226574 MT-CO2P00403 227 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 HFEQ30201 348 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 ZNF658BQ4V348 819 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-201ENST00000226574 OR2V1Q8NHB1 315 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 ADIPOR1Q96A54 375 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 KCNK17Q96T54 332 aa12.03□□□□□ -0.48
NFKB1-201ENST00000226574 MFNGO00587 321 aa12.02□□□□□ -0.48
NFKB1-201ENST00000226574 MBPP02686 304 aaPredicted RBP12.02□□□□□ -0.48
NFKB1-201ENST00000226574 CTXN2P0C2S0 81 aa12.02□□□□□ -0.48
NFKB1-201ENST00000226574 CCL11P51671 97 aa12.02□□□□□ -0.48
NFKB1-201ENST00000226574 NXPH1P58417 271 aa12.02□□□□□ -0.48
NFKB1-201ENST00000226574 OR8G1Q15617 311 aa12.02□□□□□ -0.48
NFKB1-201ENST00000226574 C1orf100Q5SVJ3 147 aa12.02□□□□□ -0.48
NFKB1-201ENST00000226574 RTN4RL2Q86UN3 420 aa12.02□□□□□ -0.48
NFKB1-201ENST00000226574 AQP3Q92482 292 aa12.02□□□□□ -0.48
NFKB1-201ENST00000226574 ZNF251Q9BRH9 671 aa12.02□□□□□ -0.48
NFKB1-201ENST00000226574 A0A1W2PQD3 144 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 MAP1LC3B2A6NCE7 125 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 CEACAM6P40199 344 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 NOVA1P51513 510 aaKnown RBP12.02□□□□□ -0.49
NFKB1-201ENST00000226574 DHODHQ02127 395 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF90Q03938 601 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 MEGF10Q96KG7 1140 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 TIMP4Q99727 224 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 MAP1LC3BQ9GZQ8 125 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 OR51I2Q9H344 312 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 SCN4AP35499 1836 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 RNF212BA8MTL3 300 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 NPIPB9F8W1W9 429 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 OPN1MWP04001 364 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 OPN1MW2P0DN77 364 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 OPN1MW3P0DN78 364 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 UHRF2Q96PU4 802 aa12.02□□□□□ -0.49
NFKB1-201ENST00000226574 UBE2ZQ9H832 354 aaPredicted RBP12.02□□□□□ -0.49
NFKB1-201ENST00000226574 SLC25A6P12236 298 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 FGF7P21781 194 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 FKBP2P26885 142 aaKnown RBP12.01□□□□□ -0.49
NFKB1-201ENST00000226574 RAB35Q15286 201 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 UBE2V2Q15819 145 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF573Q86YE8 665 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms