RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 DFFBO76075 338 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 ACTL6AO96019 429 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 CRYABP02511 175 aaKnown RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 TK1P04183 234 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 SPP1P10451 314 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 GNLYP22749 145 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 NPBWR1P48145 328 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 TMEM33P57088 247 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 TLE4Q04727 773 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF239Q16600 458 aaKnown RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 LCN10Q6JVE6 187 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 SHISA6Q6ZSJ9 500 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 PPP1R3BQ86XI6 285 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 STX12Q86Y82 276 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 DEFB119Q8N690 84 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 TMEM104Q8NE00 496 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 OR8G5Q8NG78 346 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 OR2M3Q8NG83 312 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 NEK7Q8TDX7 302 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 GTF3AQ92664 365 aaKnown RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 PIGTQ969N2 578 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF501Q96CX3 271 aaPredicted RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 KLHDC3Q9BQ90 382 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 PIGQQ9BRB3 760 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 PAPOLGQ9BWT3 736 aaKnown RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 PARD6GQ9BYG4 376 aaPredicted RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 SLC35B3Q9H1N7 401 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 PARPBPQ9NWS1 579 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 SEMA5BQ9P283 1151 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 MYOTQ9UBF9 498 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 FAM96BQ9Y3D0 163 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 NSG1A0A0A6YYJ2 146 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 IGHV3-20A0A0C4DH32 117 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 KIR2DS1A0A191URI9 304 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 WIPF3A6NGB9 483 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 XRCC2O43543 280 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 CDS2O95674 445 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 F12P00748 615 aaPredicted RBP3.47□□□□□ -1.85
SCN1A-214ENST00000637038 IL11P20809 199 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 CDAP32320 146 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 KIR2DS4P43632 304 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 FXYD4P59646 89 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 CLINT1Q14677 625 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 KIR2DS1Q14954 304 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 MIDNQ504T8 468 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 PLAC9Q5JTB6 97 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 SPIN3Q5JUX0 258 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 C10orf128Q5T292 105 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 BTNL8Q6UX41 500 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 LIAT1Q6ZQX7 453 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 SLC16A14Q7RTX9 510 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 DPPA2Q7Z7J5 298 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 FAM213BQ8TBF2 198 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 WFDC12Q8WWY7 111 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 MAFIPQ8WZ33 124 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 TMEM230Q96A57 120 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 AKR1E2Q96JD6 320 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 LURAP1Q96LR2 239 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 RTBDNQ9BSG5 229 aaPredicted RBP3.47□□□□□ -1.85
SCN1A-214ENST00000637038 SF3B5Q9BWJ5 86 aaKnown RBP3.47□□□□□ -1.85
SCN1A-214ENST00000637038 RTN4RQ9BZR6 473 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 MYO7AQ13402 2215 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 IGLV3-12A0A075B6K2 115 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 A0A1W2PNR3 127 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 OR6C6A6NF89 314 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 B9A039 149 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 TNFSF15O95150 251 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 MBPP02686 304 aaPredicted RBP3.47□□□□□ -1.85
SCN1A-214ENST00000637038 MMP9P14780 707 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 FAHP16930 419 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF708P17019 499 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 LPAR6P43657 344 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 SSR4P51571 173 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 FUT6P51993 359 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 UCP3P55916 312 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 DSCR4P56555 118 aaPredicted RBP3.47□□□□□ -1.85
SCN1A-214ENST00000637038 ZADH2Q8N4Q0 377 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 OR51F2Q8NH61 342 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 SCGB1C1Q8TD33 95 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 RBMXL1Q96E39 390 aaKnown RBP3.47□□□□□ -1.85
SCN1A-214ENST00000637038 GALNT14Q96FL9 552 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 OR10C1Q96KK4 312 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 TMPRSS5Q9H3S3 457 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 RNF150Q9ULK6 438 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 PTRH2Q9Y3E5 179 aaKnown RBP3.47□□□□□ -1.85
SCN1A-214ENST00000637038 V9GYS6 101 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 EML6Q6ZMW3 1958 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 ARGFXA6NJG6 315 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 H0YIZ8 118 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 H7C1Q1 480 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 PHF1O43189 567 aaPredicted RBP3.47□□□□□ -1.85
SCN1A-214ENST00000637038 NME2P1O60361 137 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 PDCD6O75340 191 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 OR2J2O76002 312 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 F10P00742 488 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 CD5P06127 495 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 FAM157CP0CG43 387 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF17P17021 662 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 GNRHRP30968 328 aa3.47□□□□□ -1.85
SCN1A-214ENST00000637038 PMELP40967 661 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms