RNA–Protein interactions for RNA: ENST00000636355.1

CLN3-248, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 975 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-248ENST00000636355 FAHD2BQ6P2I3 314 aaPredicted RBP8.96□□□□□ -0.98
CLN3-248ENST00000636355 WDR82Q6UXN9 313 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 C22orf34Q6ZV56 151 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 ZNF554Q86TJ5 538 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 AKAP14Q86UN6 197 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 BPIFB2Q8N4F0 458 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 ZDHHC22Q8N966 263 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 OR5AP2Q8NGF4 316 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 OR51S1Q8NGJ8 323 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 OR4K15Q8NH41 348 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 Q8TCH9 128 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 CCDC107Q8WV48 283 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 FAHD2AQ96GK7 314 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 SCGB3A2Q96PL1 93 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 SULT4A1Q9BR01 284 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 NEURL2Q9BR09 285 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 GINS4Q9BRT9 223 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 MRPL37Q9BZE1 423 aaKnown RBP8.96□□□□□ -0.98
CLN3-248ENST00000636355 ZNF286AQ9HBT8 521 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 GPN1Q9HCN4 374 aaPredicted RBP8.96□□□□□ -0.98
CLN3-248ENST00000636355 ZNF701Q9NV72 531 aaPredicted RBP8.96□□□□□ -0.98
CLN3-248ENST00000636355 DUSP13Q9UII6 198 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 AK3Q9UIJ7 227 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 ELF5Q9UKW6 265 aaPredicted RBP8.96□□□□□ -0.98
CLN3-248ENST00000636355 RNF115Q9Y4L5 304 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 NPTNQ9Y639 398 aa8.96□□□□□ -0.98
CLN3-248ENST00000636355 KIR2DS1A0A191URI9 304 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 MEIS3P1A6NDR6 274 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 TUBAL3A6NHL2 446 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 HMX3A6NHT5 357 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 A6NLC8 198 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 SNRPGP15A8MWD9 76 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 SRRM5B3KS81 715 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 SHISA9B4DS77 424 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 MCRIP1C9JLW8 97 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 M0R233 179 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 CDIPTO14735 213 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 SH2D1BO14796 132 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 RHBDL1O75783 438 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 CLDN14O95500 239 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 FCER2P06734 321 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 ZNF735P0CB33 412 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 TNFRSF1AP19438 455 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 LMO1P25800 156 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 KIR2DS4P43632 304 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 TAS2R31P59538 309 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 KIR2DS1Q14954 304 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 GRK1Q15835 563 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 ADIPOQQ15848 244 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 MICBQ29980 383 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 CHRFAM7AQ494W8 412 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 IDO2Q6ZQW0 420 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 GAPTQ8N292 157 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 GVQW1Q8N7I0 195 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 OR2Z1Q8NG97 314 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 OR4D10Q8NGI6 311 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 GIMAP1Q8WWP7 306 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 HPS1Q92902 700 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 MEGF10Q96KG7 1140 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 DHRS9Q9BPW9 319 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 SYT3Q9BQG1 590 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 TRAF4Q9BUZ4 470 aaPredicted RBP8.95□□□□□ -0.98
CLN3-248ENST00000636355 MSL2Q9HCI7 577 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 TAAR3PQ9P1P4 343 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 ANXA10Q9UJ72 324 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 POU2F3Q9UKI9 436 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 ALG5Q9Y673 324 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 KALRNO60229 2985 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 ZFYVE26Q68DK2 2539 aa8.95□□□□□ -0.98
CLN3-248ENST00000636355 NBEAQ8NFP9 2946 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.94□□□□□ -0.98
CLN3-248ENST00000636355 F8VVB4 439 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 F8VWA3 439 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 H0YL77 283 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 M0QYG6 137 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 CSN2P05814 226 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 CTXN2P0C2S0 81 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 OR4A8P0C604 315 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 OR3A3P47888 321 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 ARPC4P59998 168 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 SEC61A1P61619 476 aaKnown RBP8.94□□□□□ -0.98
CLN3-248ENST00000636355 RRAS2P62070 204 aaPredicted RBP8.94□□□□□ -0.98
CLN3-248ENST00000636355 TLE1Q04724 770 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 ATAD3CQ5T2N8 411 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 CD276Q5ZPR3 534 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 SFRP4Q6FHJ7 346 aaPredicted RBP8.94□□□□□ -0.98
CLN3-248ENST00000636355 ALKBH2Q6NS38 261 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 ADAM5Q6NVV9 412 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 FAAP20Q6NZ36 180 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 Q6P435 159 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 ACP7Q6ZNF0 438 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 OVCH2Q7RTZ1 564 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 LHFPL1Q86WI0 220 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 C11orf53Q8IXP5 236 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 DMRTC2Q8IXT2 367 aaPredicted RBP8.94□□□□□ -0.98
CLN3-248ENST00000636355 OR4S1Q8NGB4 309 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 PLPPR2Q96GM1 343 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 OR2V2Q96R30 315 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 TMEM204Q9BSN7 226 aa8.94□□□□□ -0.98
CLN3-248ENST00000636355 FAAP24Q9BTP7 215 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms