RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 HAND1O96004 215 aa19■□□□□ 0.63
IRF3-228ENST00000601291 CD8AP01732 235 aa19■□□□□ 0.63
IRF3-228ENST00000601291 RGS21Q2M5E4 152 aa19■□□□□ 0.63
IRF3-228ENST00000601291 SULT4A1Q9BR01 284 aa19■□□□□ 0.63
IRF3-228ENST00000601291 NLKQ9UBE8 527 aa19■□□□□ 0.63
IRF3-228ENST00000601291 LAMP3Q9UQV4 416 aa19■□□□□ 0.63
IRF3-228ENST00000601291 LINC00854A0A1B0GVQ3 168 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 MEIS3P1A6NDR6 274 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 MCRIP1C9JLW8 97 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 OR2H2O95918 312 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 CYB5R3P00387 301 aaPredicted RBP18.99■□□□□ 0.63
IRF3-228ENST00000601291 GLAP06280 429 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 CBX5P45973 191 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 RBM39Q14498 530 aaKnown RBP18.99■□□□□ 0.63
IRF3-228ENST00000601291 SP5Q6BEB4 398 aaPredicted RBP18.99■□□□□ 0.63
IRF3-228ENST00000601291 Q6P435 159 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 POC5Q8NA72 575 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 NEK7Q8TDX7 302 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 CACNG6Q9BXT2 260 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 CLEC4MQ9H2X3 399 aaPredicted RBP18.99■□□□□ 0.63
IRF3-228ENST00000601291 IFT46Q9NQC8 304 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 TREM2Q9NZC2 230 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 MYO18BQ8IUG5 2567 aa18.99■□□□□ 0.63
IRF3-228ENST00000601291 IGHV1-69-2A0A0G2JMI3 117 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.98■□□□□ 0.63
IRF3-228ENST00000601291 CSF1P09603 554 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 ASAH1Q13510 395 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 SUMF2Q8NBJ7 301 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 COX4I2Q96KJ9 171 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 CMSS1Q9BQ75 279 aaKnown RBP18.98■□□□□ 0.63
IRF3-228ENST00000601291 AK3Q9UIJ7 227 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 TBC1D24Q9ULP9 559 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 WIPI2Q9Y4P8 454 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 UBE2QL1A1L167 161 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 SIRPB1O00241 398 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 SSX5O60225 188 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 HPXP02790 462 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 RCVRNP35243 200 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 HOXA4Q00056 320 aaPredicted RBP18.98■□□□□ 0.63
IRF3-228ENST00000601291 BRICD5Q6PL45 260 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 CCL17Q92583 94 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 DPCDQ9BVM2 203 aaPredicted RBP18.98■□□□□ 0.63
IRF3-228ENST00000601291 TMEM106BQ9NUM4 274 aa18.98■□□□□ 0.63
IRF3-228ENST00000601291 TRAV24A0A0B4J272 114 aa18.97■□□□□ 0.63
IRF3-228ENST00000601291 RFPL4AA6NLU0 287 aa18.97■□□□□ 0.63
IRF3-228ENST00000601291 OR2AT4A6NND4 320 aa18.97■□□□□ 0.63
IRF3-228ENST00000601291 RFPL4AL1F8VTS6 287 aa18.97■□□□□ 0.63
IRF3-228ENST00000601291 CD80P33681 288 aa18.97■□□□□ 0.63
IRF3-228ENST00000601291 MICBQ29980 383 aa18.97■□□□□ 0.63
IRF3-228ENST00000601291 HFEQ30201 348 aa18.97■□□□□ 0.63
IRF3-228ENST00000601291 PAN3Q58A45 887 aaKnown RBP18.97■□□□□ 0.63
IRF3-228ENST00000601291 C20orf204Q6ZNR8 217 aa18.97■□□□□ 0.63
IRF3-228ENST00000601291 NEU4Q8WWR8 484 aaPredicted RBP18.97■□□□□ 0.63
IRF3-228ENST00000601291 RDH5Q92781 318 aa18.97■□□□□ 0.63
IRF3-228ENST00000601291 ZNF107Q9UII5 783 aaPredicted RBP18.97■□□□□ 0.63
IRF3-228ENST00000601291 CHD3Q12873 2000 aaKnown RBP18.96■□□□□ 0.63
IRF3-228ENST00000601291 USP9XQ93008 2570 aaPredicted RBP18.96■□□□□ 0.63
IRF3-228ENST00000601291 ANKRD20A5PA0PJZ0 165 aa18.96■□□□□ 0.63
IRF3-228ENST00000601291 CENPXA8MT69 81 aa18.96■□□□□ 0.63
IRF3-228ENST00000601291 SLC33A1O00400 549 aaPredicted RBP18.96■□□□□ 0.63
IRF3-228ENST00000601291 HSPB6O14558 160 aa18.96■□□□□ 0.63
IRF3-228ENST00000601291 DYRK1AQ13627 763 aa18.96■□□□□ 0.63
IRF3-228ENST00000601291 KLF9Q13886 244 aaPredicted RBP18.96■□□□□ 0.63
IRF3-228ENST00000601291 DEDD2Q8WXF8 326 aa18.96■□□□□ 0.63
IRF3-228ENST00000601291 OCSTAMPQ9BR26 566 aa18.96■□□□□ 0.63
IRF3-228ENST00000601291 SEBOXQ9HB31 216 aaPredicted RBP18.96■□□□□ 0.63
IRF3-228ENST00000601291 C12orf4Q9NQ89 552 aa18.96■□□□□ 0.63
IRF3-228ENST00000601291 CACNG2Q9Y698 323 aa18.96■□□□□ 0.63
IRF3-228ENST00000601291 TMEM178BH3BS89 294 aa18.95■□□□□ 0.62
IRF3-228ENST00000601291 PSG2P11465 335 aa18.95■□□□□ 0.62
IRF3-228ENST00000601291 MUC1P15941 1255 aaPredicted RBP18.95■□□□□ 0.62
IRF3-228ENST00000601291 LMO1P25800 156 aa18.95■□□□□ 0.62
IRF3-228ENST00000601291 RBMXP38159 391 aaKnown RBP18.95■□□□□ 0.62
IRF3-228ENST00000601291 MDH2P40926 338 aaKnown RBP18.95■□□□□ 0.62
IRF3-228ENST00000601291 CEBPDP49716 269 aaPredicted RBP18.95■□□□□ 0.62
IRF3-228ENST00000601291 SFRP4Q6FHJ7 346 aaPredicted RBP18.95■□□□□ 0.62
IRF3-228ENST00000601291 MZT2BQ6NZ67 158 aa18.95■□□□□ 0.62
IRF3-228ENST00000601291 DCDC5Q6ZRR9 648 aa18.95■□□□□ 0.62
IRF3-228ENST00000601291 TGIF2LYQ8IUE0 185 aa18.95■□□□□ 0.62
IRF3-228ENST00000601291 CYYR1Q96J86 154 aa18.95■□□□□ 0.62
IRF3-228ENST00000601291 C7orf50Q9BRJ6 194 aaKnown RBP18.95■□□□□ 0.62
IRF3-228ENST00000601291 ZNF701Q9NV72 531 aaPredicted RBP18.95■□□□□ 0.62
IRF3-228ENST00000601291 IGHV3OR15-7A0A075B7D8 119 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 OOEPA6NGQ2 149 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 PLA2G10O15496 165 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 LYRM1O43325 122 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 DTYMKP23919 212 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 PRDX2P32119 198 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 TAS2R19P59542 299 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 TEX36Q5VZQ5 186 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 BPIFB2Q8N4F0 458 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 OR5T2Q8NGG2 359 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 CHST6Q9GZX3 395 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 CHMP1AQ9HD42 196 aaPredicted RBP18.94■□□□□ 0.62
IRF3-228ENST00000601291 ETAA1Q9NY74 926 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 FLNCQ14315 2725 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 ICE1Q9Y2F5 2266 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 ROS1P08922 2347 aa18.94■□□□□ 0.62
IRF3-228ENST00000601291 PPIAL4EA0A075B759 164 aa18.93■□□□□ 0.62
IRF3-228ENST00000601291 PPIAL4DF5H284 164 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms