RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 SCCPDHQ8NBX0 429 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 RELL2Q8NC24 303 aaPredicted RBP12.45□□□□□ -0.42
MKS1-211ENST00000581761 OR5AP2Q8NGF4 316 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 CAPSLQ8WWF8 208 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 CXXC4Q9H2H0 198 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 MYOZ1Q9NP98 299 aaPredicted RBP12.45□□□□□ -0.42
MKS1-211ENST00000581761 POLDIP2Q9Y2S7 368 aa12.45□□□□□ -0.42
MKS1-211ENST00000581761 SPTAN1Q13813 2472 aaKnown RBP12.45□□□□□ -0.42
MKS1-211ENST00000581761 NBPF19A0A087WUL8 3843 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 IGKV1D-8A0A087WSZ0 117 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 FAM221AA4D161 298 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 C16orf97H3BN30 126 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 H3BUI4 141 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 SDCBPO00560 298 aaPredicted RBP12.44□□□□□ -0.42
MKS1-211ENST00000581761 MLNRO43193 412 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 TPD52L2O43399 206 aaKnown RBP12.44□□□□□ -0.42
MKS1-211ENST00000581761 C1QBP02746 253 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 GRPP07492 148 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 OR4E1P0C645 316 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 CCKARP32238 428 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 DAZAP2Q15038 168 aaPredicted RBP12.44□□□□□ -0.42
MKS1-211ENST00000581761 CDK10Q15131 360 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 KCNJ8Q15842 424 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 FAM76BQ5HYJ3 339 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 OR13G1Q8NGZ3 307 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 TERB2Q8NHR7 220 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 ZNF431Q8TF32 576 aaPredicted RBP12.44□□□□□ -0.42
MKS1-211ENST00000581761 RND1Q92730 232 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 MRGPRFQ96AM1 343 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 ZNF486Q96H40 463 aaPredicted RBP12.44□□□□□ -0.42
MKS1-211ENST00000581761 USB1Q9BQ65 265 aaKnown RBP12.44□□□□□ -0.42
MKS1-211ENST00000581761 VKORC1Q9BQB6 163 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 RHOFQ9HBH0 211 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 ZNF286AQ9HBT8 521 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 CHMP1AQ9HD42 196 aaPredicted RBP12.44□□□□□ -0.42
MKS1-211ENST00000581761 JKAMPQ9P055 326 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 RCC2Q9P258 522 aaKnown RBP12.44□□□□□ -0.42
MKS1-211ENST00000581761 ZGRF1Q86YA3 2104 aa12.44□□□□□ -0.42
MKS1-211ENST00000581761 CENPEQ02224 2701 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 CLEC18AA5D8T8 446 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 FPR2P25090 351 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 DUSP1P28562 367 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 GZMKP49863 264 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 ZNF154Q13106 437 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 GRK1Q15835 563 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 CLEC18BQ6UXF7 455 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 NLRC3Q7RTR2 1065 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 SLC25A42Q86VD7 318 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 Q8IYB0 196 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 MUC20Q8N307 709 aaPredicted RBP12.43□□□□□ -0.42
MKS1-211ENST00000581761 SPICQ8N5J4 248 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 SPERTQ8NA61 448 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 CLEC18CQ8NCF0 446 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 MARCH1Q8TCQ1 289 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 NEK7Q8TDX7 302 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 SCGB3A2Q96PL1 93 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 DMRTA2Q96SC8 542 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 ZNF436Q9C0F3 470 aaPredicted RBP12.43□□□□□ -0.42
MKS1-211ENST00000581761 SPACA1Q9HBV2 294 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 C12orf4Q9NQ89 552 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 ANXA10Q9UJ72 324 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 OSGIN2Q9Y236 505 aa12.43□□□□□ -0.42
MKS1-211ENST00000581761 POLEQ07864 2286 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 IGHV3-64DA0A0J9YX35 117 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 MCRIP1C9JLW8 97 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 ATP6V1G2-DDX39BF2Z307 99 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 F5H5P2 479 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 CDIPTO14735 213 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 FABP7O15540 132 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 PGA5P0DJD9 388 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 GLRXP35754 106 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 NPY4RP50391 375 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 TAS2R31P59538 309 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 RPS23P62266 143 aaKnown RBP12.42□□□□□ -0.42
MKS1-211ENST00000581761 MZT1Q08AG7 82 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 ESPL1Q14674 2120 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 VHLLQ6RSH7 139 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 SLC22A25Q6T423 547 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 Q6ZR03 302 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 OVCH2Q7RTZ1 564 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 LHFPL1Q86WI0 220 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 WFDC8Q8IUA0 241 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 C12orf45Q8N5I9 185 aaPredicted RBP12.42□□□□□ -0.42
MKS1-211ENST00000581761 UXS1Q8NBZ7 420 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 OR2AK2Q8NG84 335 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 PRR7Q8TB68 274 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 FN3KRPQ9HA64 309 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 MSL2Q9HCI7 577 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 MEMO1Q9Y316 297 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 NPTNQ9Y639 398 aa12.42□□□□□ -0.42
MKS1-211ENST00000581761 C3orf80F5H4A9 247 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 DEGS1O15121 323 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 NXPH2O95156 264 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 PGAM2P15259 253 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 CD40P25942 277 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 ERP29P30040 261 aaKnown RBP12.41□□□□□ -0.42
MKS1-211ENST00000581761 GMFBP60983 142 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 UBE2MP61081 183 aaKnown RBP12.41□□□□□ -0.42
MKS1-211ENST00000581761 NKX6-1P78426 367 aaPredicted RBP12.41□□□□□ -0.42
MKS1-211ENST00000581761 MSMPQ1L6U9 139 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms