RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ZNF488Q96MN9 340 aa4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 TSSK2Q96PF2 358 aa4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 HIST1H2AAQ96QV6 131 aa4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 KCNJ15Q99712 375 aa4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 POLR2J2Q9GZM3 115 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 POLR2J3Q9H1A7 115 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 C11orf68Q9H3H3 251 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 GAL3ST2Q9H3Q3 398 aa4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 RANGRFQ9HD47 186 aaPredicted RBP4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 BRD7Q9NPI1 651 aa4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 ZNF107Q9UII5 783 aaPredicted RBP4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 ENPP5Q9UJA9 477 aa4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 N6AMT1Q9Y5N5 214 aa4.88□□□□□ -1.63
HERPUD1-217ENST00000569429 IGLV2-18A0A075B6J9 118 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 TRAV41A0A0B4J266 112 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 OR5B21A6NL26 309 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 ZNF732B4DXR9 585 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 ATP6V0E1O15342 81 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 TBX1O43435 398 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 ITM2AO43736 263 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 SOX15O60248 233 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 NXPH2O95156 264 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 IFI30P13284 250 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 HOXB9P17482 250 aaPredicted RBP4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 ACKR3P25106 362 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 ERP29P30040 261 aaKnown RBP4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 CDKN2AP42771 156 aaKnown RBP4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 SLC18A1P54219 525 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 APOC4P55056 127 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 XGP55808 180 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 MADCAM1Q13477 382 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 KPNB1Q14974 876 aaKnown RBP4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 GFOD2Q3B7J2 385 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 CEACAM21Q3KPI0 293 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 CD300EQ496F6 205 aaPredicted RBP4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 OGFOD2Q6N063 350 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 PTCHD4Q6ZW05 846 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 ZNF367Q7RTV3 350 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 SLC16A13Q7RTY0 426 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 TRAPPC6BQ86SZ2 158 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 NR2C2APQ86WQ0 139 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 LINC00528Q8N1L1 170 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 ZNF781Q8N8C0 355 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 CORO2AQ92828 525 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 RNF126Q9BV68 326 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 PNPOQ9NVS9 261 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 AIG1Q9NVV5 245 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 THAP1Q9NVV9 213 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 TAS2R3Q9NYW6 316 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 MDFICQ9P1T7 246 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 RIMS3Q9UJD0 308 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 B9D1Q9UPM9 204 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 RAP2CQ9Y3L5 183 aa4.87□□□□□ -1.63
HERPUD1-217ENST00000569429 KIR2DL5BA0A0G2JN68 375 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 KIR2DL5BA0A0G2JPC4 375 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 TMEM82A0PJX8 343 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 J3QR06 171 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 M0QX08 132 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 PRB4P10163 310 aaPredicted RBP4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 PEX2P28328 305 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 SLC6A6P31641 620 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 SYNJ2BPP57105 145 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 TAS2R41P59536 307 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 ZNF816Q0VGE8 651 aaPredicted RBP4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 SF3A3Q12874 501 aaKnown RBP eCLIP4.86□□□□□ -1.631e-8■■□□□ 12.2
HERPUD1-217ENST00000569429 MOGAT2Q3SYC2 334 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 C19orf54Q5BKX5 351 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 C6orf10Q5SRN2 563 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 UTF1Q5T230 341 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 LYPD4Q6UWN0 246 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 PRSS45Q7RTY3 260 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 C5orf24Q7Z6I8 188 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 KIR2DL5AQ8N109 375 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 OR5A2Q8NGI9 324 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 OR13C2Q8NGS9 318 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 KIR2DL5BQ8NHK3 375 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 HAVCR2Q8TDQ0 301 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 COPS4Q9BT78 406 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 RGCCQ9H4X1 137 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 SLA2Q9H6Q3 261 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 NRIP3Q9NQ35 241 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 ZC4H2Q9NQZ6 224 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 MRPL22Q9NWU5 206 aaKnown RBP4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 COPS3Q9UNS2 423 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 GMEB1Q9Y692 573 aa4.86□□□□□ -1.63
HERPUD1-217ENST00000569429 TRGV10A0A0A0MS01 117 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 IGHV1-3A0A0C4DH29 117 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 A0A1W2PN81 502 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 TRPC5OSA6NMA1 111 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 EFCAB9A8MZ26 197 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 J3QT63 122 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 SOCS2O14508 198 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 MAGEB3O15480 346 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 TXNDC12O95881 172 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 MOSP00540 346 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 AMBPP02760 352 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 ANXA2P07355 339 aaKnown RBP4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 CD1BP29016 333 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 CHRNA7P36544 502 aa4.85□□□□□ -1.63
HERPUD1-217ENST00000569429 F2RL1P55085 397 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms