RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 VSIG10L2P0DP72 767 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 DUSP1P28562 367 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 ARPC4P59998 168 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 CDK10Q15131 360 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 FCN2Q15485 313 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 GRK1Q15835 563 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 ATPAF1Q5TC12 328 aaPredicted RBP16.59■□□□□ 0.25
CLN6-205ENST00000564846 ZNF626Q68DY1 528 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 OR2Z1Q8NG97 314 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 DYRK2Q92630 601 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 WFIKKN1Q96NZ8 548 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 SEC22CQ9BRL7 303 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 EHFQ9NZC4 300 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 IGKV1D-8A0A087WSZ0 117 aa16.58■□□□□ 0.24
CLN6-205ENST00000564846 NXPH2O95156 264 aa16.58■□□□□ 0.24
CLN6-205ENST00000564846 CD200P41217 278 aa16.58■□□□□ 0.24
CLN6-205ENST00000564846 BSPH1Q075Z2 132 aa16.58■□□□□ 0.24
CLN6-205ENST00000564846 RBM39Q14498 530 aaKnown RBP16.58■□□□□ 0.24
CLN6-205ENST00000564846 SRSF7Q16629 238 aaKnown RBP eCLIP16.58■□□□□ 0.24
CLN6-205ENST00000564846 SPIN3Q5JUX0 258 aa16.58■□□□□ 0.24
CLN6-205ENST00000564846 FIP1L1Q6UN15 594 aaKnown RBP16.58■□□□□ 0.24
CLN6-205ENST00000564846 TCTE3Q8IZS6 198 aa16.58■□□□□ 0.24
CLN6-205ENST00000564846 LILRB4Q8NHJ6 448 aa16.58■□□□□ 0.24
CLN6-205ENST00000564846 GTF3AQ92664 365 aaKnown RBP16.58■□□□□ 0.24
CLN6-205ENST00000564846 RNASE6Q93091 150 aaKnown RBP16.58■□□□□ 0.24
CLN6-205ENST00000564846 MRPL24Q96A35 216 aaKnown RBP16.58■□□□□ 0.24
CLN6-205ENST00000564846 MRGPRFQ96AM1 343 aa16.58■□□□□ 0.24
CLN6-205ENST00000564846 MRPL37Q9BZE1 423 aaKnown RBP16.58■□□□□ 0.24
CLN6-205ENST00000564846 ZNF286AQ9HBT8 521 aa16.58■□□□□ 0.24
CLN6-205ENST00000564846 HES4Q9HCC6 221 aa16.58■□□□□ 0.24
CLN6-205ENST00000564846 CA10Q9NS85 328 aa16.58■□□□□ 0.24
CLN6-205ENST00000564846 IGHV3-64DA0A0J9YX35 117 aa16.57■□□□□ 0.24
CLN6-205ENST00000564846 A6NLC8 198 aa16.57■□□□□ 0.24
CLN6-205ENST00000564846 OR2AT4A6NND4 320 aa16.57■□□□□ 0.24
CLN6-205ENST00000564846 DEGS1O15121 323 aa16.57■□□□□ 0.24
CLN6-205ENST00000564846 PTBP3O95758 552 aaKnown RBP16.57■□□□□ 0.24
CLN6-205ENST00000564846 ZNF146Q15072 292 aa16.57■□□□□ 0.24
CLN6-205ENST00000564846 PRAMEF6Q5VXH4 476 aa16.57■□□□□ 0.24
CLN6-205ENST00000564846 SLC22A25Q6T423 547 aa16.57■□□□□ 0.24
CLN6-205ENST00000564846 TMED4Q7Z7H5 227 aa16.57■□□□□ 0.24
CLN6-205ENST00000564846 SUMF2Q8NBJ7 301 aa16.57■□□□□ 0.24
CLN6-205ENST00000564846 LRRC46Q96FV0 321 aa16.57■□□□□ 0.24
CLN6-205ENST00000564846 RIMS4Q9H426 269 aaPredicted RBP16.57■□□□□ 0.24
CLN6-205ENST00000564846 VSIG4Q9Y279 399 aa16.57■□□□□ 0.24
CLN6-205ENST00000564846 FAM221AA4D161 298 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 ZSCAN5BA6NJL1 495 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 SULT1A3P0DMM9 295 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 SULT1A4P0DMN0 295 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 ADORA2A-AS1P86434 159 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 WDR82Q6UXN9 313 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 LHFPL1Q86WI0 220 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 NEK7Q8TDX7 302 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 SCGB3A2Q96PL1 93 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 FYTTD1Q96QD9 318 aaKnown RBP16.56■□□□□ 0.24
CLN6-205ENST00000564846 CHMP1AQ9HD42 196 aaPredicted RBP16.56■□□□□ 0.24
CLN6-205ENST00000564846 TAAR3PQ9P1P4 343 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 ZNF69Q9UC07 566 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 TRAV24A0A0B4J272 114 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 FAM90A27PA6NNH2 459 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 CEACAM18A8MTB9 384 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 NAPSAO96009 420 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 MPPED2Q15777 294 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 C4orf46Q504U0 113 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 Q6P435 159 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 Q6ZS49 121 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 OR11H7Q8NGC8 314 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 ELMOD3Q96FG2 381 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 DPCDQ9BVM2 203 aaPredicted RBP16.56■□□□□ 0.24
CLN6-205ENST00000564846 ESRP2Q9H6T0 727 aaKnown RBP16.56■□□□□ 0.24
CLN6-205ENST00000564846 NECAP2Q9NVZ3 263 aa16.56■□□□□ 0.24
CLN6-205ENST00000564846 ESPL1Q14674 2120 aa16.55■□□□□ 0.24
CLN6-205ENST00000564846 ATRXP46100 2492 aa16.55■□□□□ 0.24
CLN6-205ENST00000564846 SDCBPO00560 298 aaPredicted RBP16.55■□□□□ 0.24
CLN6-205ENST00000564846 HS3ST1O14792 307 aa16.55■□□□□ 0.24
CLN6-205ENST00000564846 SH2D1BO14796 132 aa16.55■□□□□ 0.24
CLN6-205ENST00000564846 OR4E1P0C645 316 aa16.55■□□□□ 0.24
CLN6-205ENST00000564846 ZNF44P15621 663 aa16.55■□□□□ 0.24
CLN6-205ENST00000564846 ZFP69Q49AA0 526 aa16.55■□□□□ 0.24
CLN6-205ENST00000564846 ZNF826PQ6ZT77 177 aa16.55■□□□□ 0.24
CLN6-205ENST00000564846 DRAXINQ8NBI3 349 aaPredicted RBP16.55■□□□□ 0.24
CLN6-205ENST00000564846 NDRG3Q9UGV2 375 aa16.55■□□□□ 0.24
CLN6-205ENST00000564846 ECI1P42126 302 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 FAHD2BQ6P2I3 314 aaPredicted RBP16.54■□□□□ 0.24
CLN6-205ENST00000564846 SLC25A42Q86VD7 318 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 FAHD2AQ96GK7 314 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 DMRTB1Q96MA1 342 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 UFSP2Q9NUQ7 469 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 C1orf123Q9NWV4 160 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 TREM2Q9NZC2 230 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 GLS2Q9UI32 602 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 ATP23Q9Y6H3 246 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 POM121CA8CG34 1229 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 VSTM5A8MXK1 200 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 C3orf80F5H4A9 247 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 HSPB6O14558 160 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 OR2H2O95918 312 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 OR5H8P0DN80 308 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 MDH2P40926 338 aaKnown RBP16.54■□□□□ 0.24
CLN6-205ENST00000564846 ZNF81P51508 661 aa16.54■□□□□ 0.24
CLN6-205ENST00000564846 SURF2Q15527 256 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms