RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 GPR35Q9HC97 309 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 PARPBPQ9NWS1 579 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 ZNF581Q9P0T4 197 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 ZDHHC8Q9ULC8 765 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 MPPED1O15442 326 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 CXCL13O43927 109 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 NME2P1O60361 137 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 PPYP01298 95 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 B4GALT1P15291 398 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 NTF4P34130 210 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 KCNJ3P48549 501 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 RAB1AP62820 205 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 HABP2Q14520 560 aaPredicted RBP11.31□□□□□ -0.6
USB1-207ENST00000563149 ZNF266Q14584 549 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 RHEBQ15382 184 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 TSC22D1Q15714 1073 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 CEACAM16Q2WEN9 425 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 TRIM61Q5EBN2 209 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 YRDCQ86U90 279 aaKnown RBP11.31□□□□□ -0.6
USB1-207ENST00000563149 SAXO1Q8IYX7 474 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 TMEM45BQ96B21 275 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 C14orf79Q96F83 325 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 TMEM56Q96MV1 263 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 EIF5A2Q9GZV4 153 aaKnown RBP11.31□□□□□ -0.6
USB1-207ENST00000563149 ZNF442Q9H7R0 627 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 TMEM56-RWDD3S4R434 201 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 SPTBN5Q9NRC6 3674 aaKnown RBP11.3□□□□□ -0.6
USB1-207ENST00000563149 C7orf77A4D0Y5 90 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 UMAD1C9J7I0 102 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 CYTIPO60759 359 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 PRH1P02810 166 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 MMP9P14780 707 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 RGS19P49795 217 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 EWSR1Q01844 656 aaKnown RBP eCLIP11.3□□□□□ -0.6
USB1-207ENST00000563149 AWAT1Q58HT5 328 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 TSPO2Q5TGU0 170 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 DPPA2Q7Z7J5 298 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 OR2C3Q8N628 320 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 SLC35G3Q8N808 338 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 DYRK2Q92630 601 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 CPNE4Q96A23 557 aaPredicted RBP11.3□□□□□ -0.6
USB1-207ENST00000563149 BOD1Q96IK1 185 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 CLCC1Q96S66 551 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 SLC25A31Q9H0C2 315 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 TMEM222Q9H0R3 208 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 SLC35B3Q9H1N7 401 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 SPACA1Q9HBV2 294 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 SIT1Q9Y3P8 196 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 SZT2Q5T011 3432 aa11.3□□□□□ -0.6
USB1-207ENST00000563149 TMEM265A0A087WTH1 108 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 PIGBOS1A0A0B4J2F0 54 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 CLEC18AA5D8T8 446 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 K7N7A8 449 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 S100A8P05109 93 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 MMP7P09237 267 aaPredicted RBP11.29□□□□□ -0.6
USB1-207ENST00000563149 NHLH2Q02577 135 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 FOXO1Q12778 655 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 ZNF468Q5VIY5 522 aaPredicted RBP11.29□□□□□ -0.6
USB1-207ENST00000563149 COLCA1Q6ZS62 124 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 ZNF611Q8N823 705 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 CLEC18CQ8NCF0 446 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 OR11L1Q8NGX0 322 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 OR10D3Q8NH80 312 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 C2CD4CQ8TF44 421 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 ALKBH3Q96Q83 286 aaPredicted RBP11.29□□□□□ -0.6
USB1-207ENST00000563149 TP53RKQ96S44 253 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 PLEKHF2Q9H8W4 249 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 KCNJ16Q9NPI9 418 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 RANBP2P49792 3224 aaKnown RBP11.29□□□□□ -0.6
USB1-207ENST00000563149 ASCC3Q8N3C0 2202 aaKnown RBP11.29□□□□□ -0.6
USB1-207ENST00000563149 MYO7BQ6PIF6 2116 aa11.29□□□□□ -0.6
USB1-207ENST00000563149 TNRC6BQ9UPQ9 1833 aaKnown RBP11.29□□□□□ -0.6
USB1-207ENST00000563149 FAM221AA4D161 298 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 BTBD17A6NE02 478 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 C5orf52A6NGY3 159 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 LINC01387J3KSC0 135 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 HSPA12AO43301 675 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 GDF9O60383 454 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 PITX3O75364 302 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 SNRNP70P08621 437 aaKnown RBP11.28□□□□□ -0.6
USB1-207ENST00000563149 CTXN2P0C2S0 81 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 PATE4P0C8F1 98 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 EDN3P14138 238 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 AGAP20933 346 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 NKX2-1P43699 371 aaPredicted RBP11.28□□□□□ -0.6
USB1-207ENST00000563149 B2MP61769 119 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 BRICD5Q6PL45 260 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 CLEC9AQ6UXN8 241 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 ZNF695Q8IW36 515 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 OR1J1Q8NGS3 322 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 FGFBP3Q8TAT2 258 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 MALSU1Q96EH3 234 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 PAPOLGQ9BWT3 736 aaKnown RBP11.28□□□□□ -0.6
USB1-207ENST00000563149 LINC00470Q9BZP3 86 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 LHX6Q9UPM6 363 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 UBE2CO00762 179 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 OR7C1O76099 320 aaPredicted RBP11.28□□□□□ -0.6
USB1-207ENST00000563149 COX5BP10606 129 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 CCL4P13236 92 aa11.28□□□□□ -0.6
USB1-207ENST00000563149 ZNF44P15621 663 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms