RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 JMJD7P0C870 316 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 MMP9P14780 707 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 TUBG1P23258 451 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 TNFSF10P50591 281 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 PLAC9Q5JTB6 97 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 SLC18B1Q6NT16 456 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 PLXDC1Q8IUK5 500 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 C11orf42Q8N5U0 333 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 OR1N1Q8NGS0 311 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 EMG1Q92979 244 aaKnown RBP12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 MED12Q93074 2177 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 RAB11AP62491 216 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 ZNF117Q03924 483 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 GPR157Q5UAW9 335 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 SSX7Q7RTT5 188 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 SLC5A6Q9Y289 635 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 LRP12Q9Y561 859 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 A8MVM7 634 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 RAD51DO75771 328 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 OR6A2O95222 327 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 BPNT1O95861 308 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 CD55P08174 381 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 GLB1P16278 677 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 HNF1AP20823 631 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 ATP6V0CP27449 155 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 CCKARP32238 428 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 RPL18Q07020 188 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 SHBQ15464 509 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 ZNF74Q16587 644 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 OR2AJ1Q8NGZ0 328 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 THAP3Q8WTV1 239 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 EXTL1Q92935 676 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 OR2J1Q9GZK6 312 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 A0A0A6YYD4 124 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 NSG1A0A0A6YYJ2 146 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 A0A1W2PPQ1 181 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 ZNF705FA8MVS1 300 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 LCATP04180 440 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 ZNF705DP0CH99 300 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 ZNF705BP0CI00 300 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 WNT5AP41221 380 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 CSNK2A1P68400 391 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 ARFRP1Q13795 201 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 MRPL52Q86TS9 123 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 ZNF100Q8IYN0 542 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 SLC38A9Q8NBW4 561 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 CSNK2A3Q8NEV1 391 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 RHBDD1Q8TEB9 315 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 TMEM37Q8WXS4 190 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 NAGKQ9UJ70 344 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 LAMP3Q9UQV4 416 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 ZFP30Q9Y2G7 519 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 CHD3Q12873 2000 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 UTS2O95399 124 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 DDAH2O95865 285 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 FBLP22087 321 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 SOX8P57073 446 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 KCTD18Q6PI47 426 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 CLDND2Q8NHS1 167 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 ZNF721Q8TF20 911 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 KTI12Q96EK9 354 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 FOXJ2Q9P0K8 574 aa12.24□□□□□ -0.45
GTF3C1-203ENST00000562609 FAM230AA0A1W2PPH8 454 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 P2RY10O00398 339 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 CNOT4O95628 575 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 MPIG6BO95866 241 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 PDLIM4P50479 330 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 IDH3GP51553 393 aaPredicted RBP12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 GUSBP11Q6P575 273 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 C9orf40Q8IXQ3 194 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 TMEM123Q8N131 208 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 ADAMTS18Q8TE60 1221 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 ACY3Q96HD9 319 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 ABHD6Q9BV23 337 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 VN1R1Q9GZP7 353 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 LPAR5Q9H1C0 372 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 SERINC1Q9NRX5 453 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 LRFN1Q9P244 771 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 ANAPC10Q9UM13 185 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 LOC101059948A0A1B0GTJ6 334 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 SCDO00767 359 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 GDF9O60383 454 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 TIAF1O95411 115 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 NUDT14O95848 222 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 GSTP1P09211 210 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 HIST1H1DP16402 221 aaKnown RBP12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 OR10J1P30954 320 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 FAM69BQ5VUD6 431 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 DEGS2Q6QHC5 323 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 D2HGDHQ8N465 521 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 SLC22A24Q8N4F4 322 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 NECAP1Q8NC96 275 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 OR8G5Q8NG78 346 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 REEP6Q96HR9 211 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 SPACA5Q96QH8 159 aa12.23□□□□□ -0.45
GTF3C1-203ENST00000562609 C2orf72A6NCS6 295 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 TRDCB7Z8K6 153 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 PPP5D1E7EU14 171 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 ETV2O00321 342 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 HCRTR2O43614 444 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms