RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 BTN3A2P78410 334 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 MRPL49Q13405 166 aaKnown RBP16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 IL13RA2Q14627 380 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 ABHD17CQ6PCB6 329 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 CLEC18CQ8NCF0 446 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 APH1AQ96BI3 265 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 ST6GALNAC5Q9BVH7 336 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 ANAPC10Q9UM13 185 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 OR1A2Q9Y585 309 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 A0A1W2PQF6 199 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 HLA-DQA2P01906 255 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 H2BFMP0C1H6 154 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 CDC34P49427 236 aaPredicted RBP16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 LINC00114Q6XXX2 140 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 SPACA7Q96KW9 195 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 OR10A5Q9H207 317 aa16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 MBNL1Q9NR56 388 aaKnown RBP16.73■□□□□ 0.27
SEMA4B-215ENST00000560089 KIF26BQ2KJY2 2108 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 FANCMQ8IYD8 2048 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 IGHV2OR16-5A0A0B4J2B6 119 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 FGF17O60258 216 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 LMX1BO60663 402 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 BPNT1O95861 308 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 DBHP09172 617 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 SFTPDP35247 375 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 CDKN1AP38936 164 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 EMDP50402 254 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 CSNK2A1P68400 391 aaPredicted RBP16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 FBXL14Q8N1E6 418 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 CISD2Q8N5K1 135 aaKnown RBP16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 CSNK2A3Q8NEV1 391 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 CMTM2Q8TAZ6 248 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 SCARF2Q96GP6 870 aaPredicted RBP16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 RASL10BQ96S79 203 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 TXN2Q99757 166 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 VN1R1Q9GZP7 353 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 HHLA2Q9UM44 414 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 SLC45A2Q9UMX9 530 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 ST3GAL6Q9Y274 331 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 MRPS28Q9Y2Q9 187 aaKnown RBP16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 LOC102724200A0A096LPH7 203 aaPredicted RBP16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 CTSVO60911 334 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 HRASP01112 189 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 TNFRSF4P43489 277 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 HNRNPA3P51991 378 aaKnown RBP16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 UBE2NP61088 152 aaKnown RBP16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 QRFPP83859 136 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 LYPD6Q86Y78 171 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 SULF2Q8IWU5 870 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 MRGPRX1Q96LB2 322 aa16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 CISD1Q9NZ45 108 aaKnown RBP16.72■□□□□ 0.27
SEMA4B-215ENST00000560089 LILRA1O75019 489 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 SYNGR4O95473 234 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 CT45A8P0DMV1 189 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 CT45A9P0DMV2 189 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 ARFRP1Q13795 201 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 CT45A2Q5DJT8 189 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 Q5PR19 223 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 Q6ZN92 141 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 Q6ZS52 159 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 SMIM12Q96EX1 92 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 FOXN4Q96NZ1 517 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 GPX7Q96SL4 187 aaPredicted RBP16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 CDX2Q99626 313 aaPredicted RBP16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 HDAC8Q9BY41 377 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 PLK3Q9H4B4 646 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 WIPI2Q9Y4P8 454 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 KNL1Q8NG31 2342 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 ST8SIA3O43173 380 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 BCL2P10415 239 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 TMEM92Q6UXU6 159 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 OR4N5Q8IXE1 308 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 OR2T10Q8NGZ9 312 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 DYRK2Q92630 601 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 REEP6Q96HR9 211 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 CYYR1Q96J86 154 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 LOXL4Q96JB6 756 aa16.71■□□□□ 0.27
SEMA4B-215ENST00000560089 RPS4XP62701 263 aaKnown RBP16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 TRMT12Q53H54 448 aaKnown RBP16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 PLAC9Q5JTB6 97 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 CFAP161Q6P656 301 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 ZAR1Q86SH2 424 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 PRDM6Q9NQX0 595 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 UQCR10Q9UDW1 63 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 PRSS50Q9UI38 385 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 TRAV30A0A087WSZ9 112 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 SHISA7A6NL88 538 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 J3QW42 95 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 TCN2P20062 427 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 OMGP23515 440 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 ZNF776Q68DI1 518 aaPredicted RBP16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 LPAR5Q9H1C0 372 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 NAT8Q9UHE5 227 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 WDFY4Q6ZS81 3184 aa16.7■□□□□ 0.26
SEMA4B-215ENST00000560089 LOC107986453A0A1B0GWG9 222 aa16.69■□□□□ 0.26
SEMA4B-215ENST00000560089 SLC31A1O15431 190 aa16.69■□□□□ 0.26
SEMA4B-215ENST00000560089 SOCS1O15524 211 aa16.69■□□□□ 0.26
SEMA4B-215ENST00000560089 LATO43561 262 aa16.69■□□□□ 0.26
SEMA4B-215ENST00000560089 RAD51DO75771 328 aa16.69■□□□□ 0.26
SEMA4B-215ENST00000560089 HIST1H1DP16402 221 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms