RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 CHPT1Q8WUD6 406 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 C15orf40Q8WUR7 153 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 UBTD1Q9HAC8 227 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 HSF4Q9ULV5 492 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 PPP1R3CQ9UQK1 317 aa14.56□□□□□ -0.08
CHRNA3-206ENST00000559658 VSTM5A8MXK1 200 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 RBBP9O75884 186 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 LHBP01229 141 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 CD3DP04234 171 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 ACAA1P09110 424 aaPredicted RBP14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 ZNF44P15621 663 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 TNFSF4P23510 183 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 HLA-DMAP28067 261 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 SNRPD2P62316 118 aaKnown RBP14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 IL13RA2Q14627 380 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 ZNF146Q15072 292 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM189A2Q15884 450 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 MPV17LQ2QL34 196 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 VRK1Q99986 396 aaPredicted RBP14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 SCPEP1Q9HB40 452 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 ING3Q9NXR8 418 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 KLF2Q9Y5W3 355 aaPredicted RBP14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FBN2P35556 2912 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 HELZ2Q9BYK8 2649 aaKnown RBP14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A10PA6NDY2 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A18PA6NE21 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A16PA6NEW6 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A20PA6NIJ5 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A8PA6NJQ4 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A7PA6NKC0 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A22PA8MWA6 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A12PA8MX19 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A5PA8MXJ8 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A23PA8MXZ1 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 LYNX1G3V0Z9 82 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 SLC33A1O00400 549 aaPredicted RBP14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 PSPNO60542 156 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 HAND1O96004 215 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A15PP0C7V4 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A13PP0C7W8 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A14PP0C7W9 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A24PP0C7X0 464 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 LYNX1P0DP58 116 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 CD177Q8N6Q3 437 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 CHST6Q9GZX3 395 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 DECR2Q9NUI1 292 aa14.55□□□□□ -0.08
CHRNA3-206ENST00000559658 IGKV1D-17A0A075B6S4 117 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 A0A1B0GW55 424 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 RFPL4AA6NLU0 287 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 SERPINE3A8MV23 424 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 RFPL4AL1F8VTS6 287 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 M0QYG6 137 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 SULT1C2O00338 296 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 DUX4L2P0CJ85 424 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 DUX4L3P0CJ86 424 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 DUX4L4P0CJ87 422 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 DUX4L5P0CJ88 424 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 DUX4L6P0CJ89 424 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 DUX4L7P0CJ90 424 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 DEFA1P59665 94 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 DEFA3P59666 94 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 TESK1Q15569 626 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 PNLIPRP3Q17RR3 467 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM209AQ5JX71 171 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 DUX4L9Q6RFH8 374 aaPredicted RBP14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 OR4C16Q8NGL9 310 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 SETD6Q8TBK2 473 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 Q8TCH9 128 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 HRASLSQ9HDD0 168 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 ZNF701Q9NV72 531 aaPredicted RBP14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 DUX4Q9UBX2 424 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 LAMP3Q9UQV4 416 aa14.54□□□□□ -0.08
CHRNA3-206ENST00000559658 PTTG1O95997 202 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 CFHR2P36980 270 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 CCR6P51684 374 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 TRIM16LQ309B1 348 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 SMIM21Q3B7S5 101 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 OR10Z1Q8NGY1 313 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 DIRC2Q96SL1 478 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 DPCDQ9BVM2 203 aaPredicted RBP14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 TINAGL1Q9GZM7 467 aaPredicted RBP14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 MMP28Q9H239 520 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 PPA2Q9H2U2 334 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 MS4A5Q9H3V2 200 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 RHOFQ9HBH0 211 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 RNF7Q9UBF6 113 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 ANAPC10Q9UM13 185 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 CSMD2Q7Z408 3487 aa14.53□□□□□ -0.08
CHRNA3-206ENST00000559658 hCG_2014768A0A024R1R8 64 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 CLEC18AA5D8T8 446 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 DEGS1O15121 323 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 PSG2P11465 335 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 SELLP14151 372 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 AMY2BP19961 511 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 ATXN7L3Q14CW9 347 aaPredicted RBP14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 SPIN3Q5JUX0 258 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 CLEC18BQ6UXF7 455 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 C20orf204Q6ZNR8 217 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 LINC00596Q86U02 117 aa14.52□□□□□ -0.08
CHRNA3-206ENST00000559658 FAM90A1Q86YD7 464 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms