RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 TMPRSS5Q9H3S3 457 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 REEP1Q9H902 201 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 MEPEQ9NQ76 525 aaPredicted RBP3.91□□□□□ -1.78
SDCBP-207ENST00000520168 DNAJB11Q9UBS4 358 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 SLC25A10Q9UBX3 287 aaPredicted RBP3.91□□□□□ -1.78
SDCBP-207ENST00000520168 ENOPH1Q9UHY7 261 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.91□□□□□ -1.78
SDCBP-207ENST00000520168 A4GNTQ9UNA3 340 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 DSCAML1Q8TD84 2053 aa3.91□□□□□ -1.78
SDCBP-207ENST00000520168 FAM230AA0A1W2PPH8 454 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 TMEM82A0PJX8 343 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 ARRDC5A6NEK1 342 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 CCDC160A6NGH7 325 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 HMX3A6NHT5 357 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 FAM90A8PA6NJQ4 464 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 TNFRSF11BO00300 401 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 BHLHE40O14503 412 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 AMY2AP04746 511 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 KRT8P05787 483 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 AMY2BP19961 511 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 PRKACGP22612 351 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 CA6P23280 308 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 POU1F1P28069 291 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 GGT2P36268 569 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 TAGLN2P37802 199 aaKnown RBP3.9□□□□□ -1.79
SDCBP-207ENST00000520168 CDKN1BP46527 198 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 CEBPDP49716 269 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-207ENST00000520168 DAPP51397 102 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 GABARAPL2P60520 117 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 CTXN1P60606 82 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 ISL1P61371 349 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 BLCAPP62952 87 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 IL5RAQ01344 420 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 MEP1BQ16820 701 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 MICAQ29983 383 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 ZIK1Q3SY52 487 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-207ENST00000520168 HES5Q5TA89 166 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF691Q5VV52 312 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 STUMQ69YW2 141 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 ZFAND6Q6FIF0 208 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 HCP5Q6MZN7 132 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 TRAT1Q6PIZ9 186 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF773Q6PK81 442 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF788Q6ZQV5 615 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 IDO2Q6ZQW0 420 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 VTCN1Q7Z7D3 282 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 CYP4Z1Q86W10 505 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 ERI1Q8IV48 349 aaKnown RBP3.9□□□□□ -1.79
SDCBP-207ENST00000520168 C11orf42Q8N5U0 333 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 COMMD1Q8N668 190 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 FAM216BQ8N7L0 139 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 SLC26A10Q8NG04 563 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 OR6T1Q8NGN1 323 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 GIPC3Q8TF64 312 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 TMEM239Q8WW34 195 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 SLC7A6Q92536 515 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 PRR25Q96S07 402 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 CCL13Q99616 98 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 SAV1Q9H4B6 383 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-207ENST00000520168 SP140LQ9H930 580 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF556Q9HAH1 456 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 C19orf12Q9NSK7 152 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 ZFP57Q9NU63 452 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 SCN3BQ9NY72 215 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 PTTG2Q9NZH5 202 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 VSX1Q9NZR4 365 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-207ENST00000520168 ERGIC3Q9Y282 383 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF256Q9Y2P7 627 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-207ENST00000520168 POLR1DQ9Y2S0 133 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 TPRKBQ9Y3C4 175 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 SIRT4Q9Y6E7 314 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-207ENST00000520168 CEPT1Q9Y6K0 416 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 U3KQV3 271 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 SORL1Q92673 2214 aa3.9□□□□□ -1.79
SDCBP-207ENST00000520168 IGHV3OR15-7A0A075B7D8 119 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 A0A0U1RQV5 110 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 CD300LBA8K4G0 201 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF561-AS1K7EIQ3 104 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 RER1O15258 196 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 SIGLEC5O15389 551 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 NOS1APO75052 506 aaPredicted RBP3.89□□□□□ -1.79
SDCBP-207ENST00000520168 LYPD3O95274 346 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 CLEC3BP05452 202 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 GRPP07492 148 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 DBHP09172 617 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF735P0CB33 412 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 GSTT2P0CG29 244 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 GSTT2BP0CG30 244 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 CALCBP10092 127 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 SELLP14151 372 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 NDUFB7P17568 137 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 CRHBPP24387 322 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 SDHAP31040 664 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 DDOSTP39656 456 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 ENTPD1P49961 510 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 INSL3P51460 131 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 TMBIM6P55061 237 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 SNU13P55769 128 aaKnown RBP3.89□□□□□ -1.79
SDCBP-207ENST00000520168 DLX1P56177 255 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 SCAND1P57086 179 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms