RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TEAD3Q99594 435 aa7.41□□□□□ -1.22
NEDD9-211ENST00000508546 PBOV1Q9GZY1 135 aa7.41□□□□□ -1.22
NEDD9-211ENST00000508546 GABARAPL1Q9H0R8 117 aa7.41□□□□□ -1.22
NEDD9-211ENST00000508546 OR51V1Q9H2C8 321 aa7.41□□□□□ -1.22
NEDD9-211ENST00000508546 SMPD3Q9NY59 655 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-211ENST00000508546 NUFIP1Q9UHK0 495 aaKnown RBP7.41□□□□□ -1.22
NEDD9-211ENST00000508546 UBE2J1Q9Y385 318 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-211ENST00000508546 MOB4Q9Y3A3 225 aa7.41□□□□□ -1.22
NEDD9-211ENST00000508546 HSPE1-MOB4S4R3N1 261 aa7.41□□□□□ -1.22
NEDD9-211ENST00000508546 OOSP1A8MZH6 123 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 PRR23D1E9PI22 279 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-211ENST00000508546 PRODHO43272 600 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 ALPLP05186 524 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 PRR23D2P0DMB1 279 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-211ENST00000508546 ERP29P30040 261 aaKnown RBP7.4□□□□□ -1.22
NEDD9-211ENST00000508546 ECI1P42126 302 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 SLC35B1P78383 322 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 PPP1R8Q12972 351 aaKnown RBP7.4□□□□□ -1.22
NEDD9-211ENST00000508546 MED21Q13503 144 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 EDDM3AQ14507 147 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 SLX4IPQ5VYV7 408 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 CCDC144NLQ6NUI1 221 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 CD300LDQ6UXZ3 194 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 HEPN1Q6WQI6 88 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 Q6ZSR3 168 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 TMEM179BQ7Z7N9 219 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 ANGPTL5Q86XS5 388 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 THNSL2Q86YJ6 484 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 EGFL6Q8IUX8 553 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 HS3ST5Q8IZT8 346 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 OR5M8Q8NGP6 311 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 NRBF2Q96F24 287 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 NOL4LQ96MY1 436 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-211ENST00000508546 RDH12Q96NR8 316 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 ADI1Q9BV57 179 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 OSBPL10Q9BXB5 764 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 GPR173Q9NS66 373 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 SCOCQ9UIL1 159 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 LAMP5Q9UJQ1 280 aa7.4□□□□□ -1.22
NEDD9-211ENST00000508546 PLECQ15149 4684 aaKnown RBP7.4□□□□□ -1.23
NEDD9-211ENST00000508546 FAM90A18PA6NE21 464 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 ARRDC5A6NEK1 342 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 FAM90A16PA6NEW6 464 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 FAM90A20PA6NIJ5 464 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 FAM90A9PA6NNJ1 464 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 DHRS7CA6NNS2 312 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 FAM90A12PA8MX19 464 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 FAM90A5PA8MXJ8 464 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 F8VVB4 439 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 F8VWA3 439 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 LY6LH3BQJ8 138 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 BUB1B-PAK6H3BSN5 160 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 MGST3O14880 152 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 DENRO43583 198 aaKnown RBP7.39□□□□□ -1.23
NEDD9-211ENST00000508546 ZNF254O75437 659 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 IGHA1P01876 353 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 TTRP02766 147 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 SNRNP70P08621 437 aaKnown RBP7.39□□□□□ -1.23
NEDD9-211ENST00000508546 RPSAP08865 295 aaKnown RBP7.39□□□□□ -1.23
NEDD9-211ENST00000508546 FAM90A15PP0C7V4 464 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 FAM90A13PP0C7W8 464 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 FAM90A14PP0C7W9 464 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 FAM90A24PP0C7X0 464 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 FAM106CPP0CH98 169 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 MNDAP41218 407 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 ROM1Q03395 351 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 GK3PQ14409 553 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 GRK1Q15835 563 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 MICAQ29983 383 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 HLA-DRB5Q30154 266 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 SLC35D3Q5M8T2 416 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 TPTE2P1Q5T6R2 138 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 BAIAP2L2Q6UXY1 529 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 TPRX1Q8N7U7 411 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 OR52N4Q8NGI2 321 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 TEX47Q8TBZ9 253 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 CEP19Q96LK0 163 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 CNBD2Q96M20 576 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 DUX3Q96PT4 197 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 MROQ9BYG7 248 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 ANKRD60Q9BZ19 345 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 YIPF3Q9GZM5 350 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 MTCH1Q9NZJ7 389 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 ZNF256Q9Y2P7 627 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-211ENST00000508546 ORC6Q9Y5N6 252 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 SMAD5-AS1Q9Y6J3 95 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 V9GYS6 101 aa7.39□□□□□ -1.23
NEDD9-211ENST00000508546 A0A087X0M5 115 aa7.38□□□□□ -1.23
NEDD9-211ENST00000508546 A0A1B0GX30 115 aa7.38□□□□□ -1.23
NEDD9-211ENST00000508546 SERPINE3A8MV23 424 aa7.38□□□□□ -1.23
NEDD9-211ENST00000508546 SEC14L6B5MCN3 397 aa7.38□□□□□ -1.23
NEDD9-211ENST00000508546 FGF16O43320 207 aa7.38□□□□□ -1.23
NEDD9-211ENST00000508546 PSPNO60542 156 aa7.38□□□□□ -1.23
NEDD9-211ENST00000508546 SRSF10O75494 262 aaKnown RBP7.38□□□□□ -1.23
NEDD9-211ENST00000508546 HAND1O96004 215 aa7.38□□□□□ -1.23
NEDD9-211ENST00000508546 IGHG2P01859 326 aa7.38□□□□□ -1.23
NEDD9-211ENST00000508546 PRKACGP22612 351 aa7.38□□□□□ -1.23
NEDD9-211ENST00000508546 SLC2A5P22732 501 aa7.38□□□□□ -1.23
NEDD9-211ENST00000508546 CDK2P24941 298 aa7.38□□□□□ -1.23
NEDD9-211ENST00000508546 CAPGP40121 348 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms