RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 BIRC8Q96P09 236 aa2.13□□□□□ -2.07
SMC4-225ENST00000497203 CATSPER2Q96P56 530 aa2.13□□□□□ -2.07
SMC4-225ENST00000497203 RTBDNQ9BSG5 229 aaPredicted RBP2.13□□□□□ -2.07
SMC4-225ENST00000497203 TMEM38BQ9NVV0 291 aa2.13□□□□□ -2.07
SMC4-225ENST00000497203 TAS2R1Q9NYW7 299 aa2.13□□□□□ -2.07
SMC4-225ENST00000497203 GOLGA8QA0A0J9YX86 632 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 PGPA6NDG6 321 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 IGLL5B9A064 214 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 F8VP50 259 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 NEMFO60524 1076 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 UBE2KP61086 200 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 PRKCDQ05655 676 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 TRAM1Q15629 374 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 BSXQ3C1V8 233 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 ACTBL2Q562R1 376 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 GLYATQ6IB77 296 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 ZNF773Q6PK81 442 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 TPGS1Q6ZTW0 290 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 GALNT10Q86SR1 603 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 MRPL52Q86TS9 123 aaKnown RBP2.12□□□□□ -2.07
SMC4-225ENST00000497203 ZFP62Q8NB50 900 aaPredicted RBP2.12□□□□□ -2.07
SMC4-225ENST00000497203 OR2Y1Q8NGV0 311 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 CASTOR1Q8WTX7 329 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 CCL17Q92583 94 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 FMC1Q96HJ9 113 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 APOL4Q9BPW4 351 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 ANAPC13Q9BS18 74 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 TRIM45Q9H8W5 580 aaPredicted RBP2.12□□□□□ -2.07
SMC4-225ENST00000497203 MAT2BQ9NZL9 334 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 CYB5R1Q9UHQ9 305 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 C14orf166Q9Y224 244 aaKnown RBP2.12□□□□□ -2.07
SMC4-225ENST00000497203 TRAPPC1Q9Y5R8 145 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 SHROOM3Q8TF72 1996 aa2.12□□□□□ -2.07
SMC4-225ENST00000497203 NOS1P29475 1434 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 A0A1B0GXF2 115 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 LEUTXA8MZ59 168 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 RNASEK-C17orf49H0YIS7 233 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 K7ERS5 55 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 CRXO43186 299 aaPredicted RBP2.11□□□□□ -2.07
SMC4-225ENST00000497203 MYO1DO94832 1006 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 IGHG2P01859 326 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 SOD3P08294 240 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 SLC2A1P11166 492 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 LGALS7P47929 136 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 CD164Q04900 197 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 BAXQ07812 192 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 ENDOGQ14249 297 aaKnown RBP2.11□□□□□ -2.07
SMC4-225ENST00000497203 CEACAM21Q3KPI0 293 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 Q6ZT83 130 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 PAGE2Q7Z2X7 111 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 TMEM144Q7Z5S9 345 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 LRRC6Q86X45 466 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 TWIST2Q8WVJ9 160 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 RBPMSQ93062 196 aaKnown RBP2.11□□□□□ -2.07
SMC4-225ENST00000497203 SLC25A31Q9H0C2 315 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 LHX5Q9H2C1 402 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 VSIRQ9H7M9 311 aa2.11□□□□□ -2.07
SMC4-225ENST00000497203 MRM2Q9UI43 246 aaKnown RBP2.11□□□□□ -2.07
SMC4-225ENST00000497203 USP42Q9H9J4 1324 aaKnown RBP2.11□□□□□ -2.07
SMC4-225ENST00000497203 IGKV2-24A0A0C4DH68 120 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 A0A1W2PRG6 482 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 MYBPHLA2RUH7 354 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 HSBP1L1C9JCN9 74 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 I3L4J1 428 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 CDIPTO14735 213 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 FFAR1O14842 300 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 FABP7O15540 132 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 INAFM2P0DMQ5 153 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 MAGEA3P43357 314 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 HBG1P69891 147 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 HBG2P69892 147 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 FMODQ06828 376 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 OR4D1Q15615 310 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 TMEM241Q24JQ0 296 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 GOLGA7BQ2TAP0 167 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 TMEM215Q68D42 235 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 LAMTOR1Q6IAA8 161 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 AHSA2Q719I0 299 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 AMN1Q8IY45 258 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 SYCE1Q8N0S2 351 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 C17orf78Q8N4C9 275 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 OR4C13Q8NGP0 309 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 OR8S1Q8NH09 359 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 C2orf15Q8WU43 125 aaKnown RBP2.1□□□□□ -2.07
SMC4-225ENST00000497203 OR2V2Q96R30 315 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 CYTH2Q99418 400 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 SHANK2-AS3Q9BTD1 123 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 SUCNR1Q9BXA5 334 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 ANGPTL4Q9BY76 406 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 RHOFQ9HBH0 211 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 IFT46Q9NQC8 304 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 ZNF706Q9Y5V0 76 aaPredicted RBP2.1□□□□□ -2.07
SMC4-225ENST00000497203 PRR14LQ5THK1 2151 aa2.1□□□□□ -2.07
SMC4-225ENST00000497203 VWA8A3KMH1 1905 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 SHANK1Q9Y566 2161 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 IGHV3-21A0A0B4J1V1 117 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 VGLL3A8MV65 326 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 M0QX08 132 aa2.09□□□□□ -2.07
SMC4-225ENST00000497203 SHOX2O60902 331 aaPredicted RBP2.09□□□□□ -2.07
SMC4-225ENST00000497203 ZNF83P51522 516 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms