RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CES1P1Q9UKY3 287 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 ETV3LQ6ZN32 361 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 WDR54Q9H977 334 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 KNL1Q8NG31 2342 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 TPPP2P59282 170 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 CLDN34H7C241 214 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 SOX15O60248 233 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 RPL13AP40429 203 aaKnown RBP16.9■□□□□ 0.3
COL27A1-207ENST00000494090 F5P12259 2224 aa16.9■□□□□ 0.3
COL27A1-207ENST00000494090 UCNP55089 124 aa16.89■□□□□ 0.3
COL27A1-207ENST00000494090 OR8B3Q8NGG8 313 aa16.89■□□□□ 0.3
COL27A1-207ENST00000494090 OR8B2Q96RD0 313 aa16.89■□□□□ 0.3
COL27A1-207ENST00000494090 GPA33Q99795 319 aa16.89■□□□□ 0.3
COL27A1-207ENST00000494090 ANXA10Q9UJ72 324 aa16.89■□□□□ 0.3
COL27A1-207ENST00000494090 SEZ6L2Q6UXD5 910 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 CLEC18BQ6UXF7 455 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 OR11H7Q8NGC8 314 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 BGLAPP02818 100 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 TMEM33P57088 247 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 ASCL5Q7RTU5 278 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 LEUTXA8MZ59 168 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 PNPP00491 289 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 SLC25A5P05141 298 aaKnown RBP16.89■□□□□ 0.29
COL27A1-207ENST00000494090 OR3A1P47881 315 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 SLC25A42Q86VD7 318 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 UBALD1Q8TB05 177 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 CACNG5Q9UF02 275 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 FZR1Q9UM11 496 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 MAP1LC3B2A6NCE7 125 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 ADAP1O75689 374 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 CRHP06850 196 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 COX7A1P24310 79 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 PTPMT1Q8WUK0 201 aaPredicted RBP16.89■□□□□ 0.29
COL27A1-207ENST00000494090 MAP1LC3BQ9GZQ8 125 aa16.89■□□□□ 0.29
COL27A1-207ENST00000494090 CDX4O14627 284 aaPredicted RBP16.88■□□□□ 0.29
COL27A1-207ENST00000494090 KIR2DL1P43626 348 aaPredicted RBP16.88■□□□□ 0.29
COL27A1-207ENST00000494090 TMEM241Q24JQ0 296 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 TMEM65Q6PI78 240 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 DEFB108AA8MXU0 73 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 HRKO00198 91 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 EML2O95834 649 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 OPN4Q9UHM6 478 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 COL5A3P25940 1745 aaPredicted RBP16.88■□□□□ 0.29
COL27A1-207ENST00000494090 ZFP36L2P47974 494 aaKnown RBP16.88■□□□□ 0.29
COL27A1-207ENST00000494090 AMTP48728 403 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 SPINK14Q6IE38 97 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 LIAT1Q6ZQX7 453 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 OR52L2PQ8NGH6 319 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 NOL4LQ96MY1 436 aaPredicted RBP16.88■□□□□ 0.29
COL27A1-207ENST00000494090 PTP4A3O75365 173 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 P2RY1P47900 373 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 LSM11P83369 360 aaKnown RBP eCLIP16.88■□□□□ 0.291e-10■■■□□ 17.5
COL27A1-207ENST00000494090 OR2M7Q8NG81 312 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 ASB5Q8WWX0 329 aa16.88■□□□□ 0.29
COL27A1-207ENST00000494090 OOEPA6NGQ2 149 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 IL24Q13007 206 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 FNDC7Q5VTL7 733 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 CLEC9AQ6UXN8 241 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 DPF1Q92782 380 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 PLPPR2Q96GM1 343 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 SLC52A3Q9NQ40 469 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 TRAPPC1Q9Y5R8 145 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 UBR3Q6ZT12 1888 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 MS4A18H0YCH9 400 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 SOCS1O15524 211 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 HPXP02790 462 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 PEBP1P30086 187 aaKnown RBP16.87■□□□□ 0.29
COL27A1-207ENST00000494090 MRPS11P82912 194 aaKnown RBP16.87■□□□□ 0.29
COL27A1-207ENST00000494090 MS4A18Q3C1V0 323 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 MRGPRDQ8TDS7 321 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 STARD10Q9Y365 291 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 PNLIPP16233 465 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 GAB4Q2WGN9 574 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 SH2D2AQ9NP31 389 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 ST6GALNAC2Q9UJ37 374 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 MCM3APO60318 1980 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 CD1AP06126 327 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 GZMHP20718 246 aa16.87■□□□□ 0.29
COL27A1-207ENST00000494090 ZNF71Q9NQZ8 489 aaPredicted RBP16.87■□□□□ 0.29
COL27A1-207ENST00000494090 MAP1BP46821 2468 aaKnown RBP16.87■□□□□ 0.29
COL27A1-207ENST00000494090 PATE4P0C8F1 98 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 CD200P41217 278 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 GGTLC2Q14390 218 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 STPG2Q8N412 459 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 BVESQ8NE79 360 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 OR10AC1Q8NH08 325 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 HEXA-AS1Q9H8Q6 139 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 TRAV8-7A0A075B6U6 113 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 TRDCB7Z8K6 153 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 CA11O75493 328 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 PTTG1IPP53801 180 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 ZNF260Q3ZCT1 412 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 OR2I1PQ8NGU4 316 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 NTMQ9P121 344 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 OR1A1Q9P1Q5 309 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 THSD7AQ9UPZ6 1657 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 LOC102723971A0A1B0GUV8 181 aa16.86■□□□□ 0.29
COL27A1-207ENST00000494090 DNASE2O00115 360 aaPredicted RBP16.86■□□□□ 0.29
COL27A1-207ENST00000494090 MOSPD3O75425 235 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms