RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SESN1Q9Y6P5 492 aa6.73□□□□□ -1.33
SMARCB1-207ENST00000491967 DAPL1A0PJW8 107 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 SAC3D1A6NKF1 404 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 H3BSH0 61 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 SH2D1BO14796 132 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 OR2H2O95918 312 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 RPSAP08865 295 aaKnown RBP6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 ZP1P60852 638 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 BLCAPP62952 87 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 EMX1Q04741 257 aaPredicted RBP6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 GALEQ14376 348 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 CDK5R1Q15078 307 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 GRK1Q15835 563 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 ELP2Q6IA86 826 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 ASCL4Q6XD76 172 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 FAM220AQ7Z4H9 259 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 RTN4RL2Q86UN3 420 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 NDUFA11Q86Y39 141 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 CHST4Q8NCG5 386 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 WFDC9Q8NEX5 89 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 PYDC1Q8WXC3 89 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 LGALS12Q96DT0 336 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 RNFT2Q96EX2 444 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 OPALINQ96PE5 141 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 JAM3Q9BX67 310 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 CLEC7AQ9BXN2 247 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 PRSS22Q9GZN4 317 aa6.72□□□□□ -1.33
SMARCB1-207ENST00000491967 EI24O14681 340 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 ZFPL1O95159 310 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 AMY1AP04745 511 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 AMY2AP04746 511 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 HTR1AP08908 422 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 CD28P10747 220 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 JUNBP17275 347 aaPredicted RBP6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 GABRR1P24046 479 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 HTR1DP28221 377 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 DUSP1P28562 367 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 CD83Q01151 205 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 MRPL28Q13084 256 aaKnown RBP6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 ALKBH1Q13686 389 aaKnown RBP6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 HABP2Q14520 560 aaPredicted RBP6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM189A2Q15884 450 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 FBLN7Q53RD9 439 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 OR52W1Q6IF63 320 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 ZFP1Q6P2D0 407 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 C16orf82Q7Z2V1 217 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 ABHD12Q8N2K0 398 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 ZNF676Q8N7Q3 588 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 TPRX1Q8N7U7 411 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 COQ2Q96H96 371 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 C4orf36Q96KX1 117 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 CHST6Q9GZX3 395 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 LIN7BQ9HAP6 207 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 INPP5EQ9NRR6 644 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 IMPAD1Q9NX62 359 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 DPM3Q9P2X0 92 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 MYRFQ9Y2G1 1151 aa6.71□□□□□ -1.34
SMARCB1-207ENST00000491967 ODAMA1E959 279 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 MEX3AA1L020 520 aaKnown RBP6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 FUOMA2VDF0 154 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM90A18PA6NE21 464 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM90A16PA6NEW6 464 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM90A20PA6NIJ5 464 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 TMEM212A6NML5 194 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 SNTNA6NMZ2 147 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM90A9PA6NNJ1 464 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM90A12PA8MX19 464 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM90A5PA8MXJ8 464 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 E9PI62 339 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 G3V4G9 280 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 J3QLW9 94 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 SLC33A1O00400 549 aaPredicted RBP6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 MPZL2O60487 215 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 FBXO24O75426 580 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 CIB2O75838 187 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 CYB5AP00167 134 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM90A15PP0C7V4 464 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM90A13PP0C7W8 464 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM90A14PP0C7W9 464 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 FAM90A24PP0C7X0 464 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 VSIG10L2P0DP72 767 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 DBTP11182 482 aaKnown RBP6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 ZNF19P17023 458 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 ZNF20P17024 532 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 PRKACAP17612 351 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 GDNFP39905 211 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 GLIPR1P48060 266 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 POU3F4P49335 361 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 AESQ08117 197 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 RAB40BQ12829 278 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 IL18R1Q13478 541 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 EDDM3AQ14507 147 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 KPNB1Q14974 876 aaKnown RBP6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 KISS1Q15726 138 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 C17orf58Q2M2W7 97 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 TCTEX1D4Q5JR98 221 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 HIST2H2BDQ6DRA6 164 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 BAIAP2L2Q6UXY1 529 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 TMEM219Q86XT9 240 aa6.7□□□□□ -1.34
SMARCB1-207ENST00000491967 THNSL2Q86YJ6 484 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms