RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 SULT1C2O00338 296 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 KPNA4O00629 521 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-209ENST00000486618 COPEO14579 308 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 CHEK1O14757 476 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 PHYHO14832 338 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 ADRA2AP08913 450 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 NUDT17P0C025 328 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 UQCRBP14927 111 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 OR3A3P47888 321 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 AKR1D1P51857 326 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 CRYBA4P53673 196 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 FOXA1P55317 472 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 H3F3AP84243 136 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 NHLH2Q02577 135 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 POU3F1Q03052 451 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-209ENST00000486618 APOFQ13790 326 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 KIAA0040Q15053 153 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF141Q15928 474 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 MAPK14Q16539 360 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 SLC35D3Q5M8T2 416 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 RBM48Q5RL73 367 aaKnown RBP5.73□□□□□ -1.49
HDAC3-209ENST00000486618 DHRS4L2Q6PKH6 230 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 AAED1Q7RTV5 226 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 GRINAQ7Z429 371 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 ZCCHC24Q8N2G6 241 aaKnown RBP5.73□□□□□ -1.49
HDAC3-209ENST00000486618 BPIFB2Q8N4F0 458 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 OR4A4PQ8NGN8 299 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 OR4K15Q8NH41 348 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 CLDND2Q8NHS1 167 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 OR5P2Q8WZ92 322 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 DDIT4LQ96D03 193 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 PPP3R2Q96LZ3 170 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 TMEM56Q96MV1 263 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 IL4I1Q96RQ9 567 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 SDF2Q99470 211 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 PHB2Q99623 299 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 MICU1Q9BPX6 476 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 NEURL2Q9BR09 285 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 ALG8Q9BVK2 526 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 C1QTNF5Q9BXJ0 243 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 BARHL1Q9BZE3 327 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 GSTO2Q9H4Y5 243 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 SLC52A3Q9NQ40 469 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 SEC14L4Q9UDX3 406 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 TMEM56-RWDD3S4R434 201 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 WNK1Q9H4A3 2382 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 PPIAL4CA0A0B4J2A2 164 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 RNF222A6NCQ9 220 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 OR11H12B2RN74 326 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 NPIPB11E5RHQ5 1161 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF587BE7ETH6 402 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 LYNX1G3V0Z9 82 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 K7EP13 123 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 CXCR6O00574 342 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 FZD7O75084 574 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 FCN3O75636 299 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 CYB5R3P00387 301 aaPredicted RBP5.72□□□□□ -1.49
HDAC3-209ENST00000486618 IGLV1-44P01699 117 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 CECR9P0C854 216 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 PPIAL4GP0DN37 164 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 LYNX1P0DP58 116 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 HKR1P10072 659 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 SDC1P18827 310 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 EFNA1P20827 205 aaPredicted RBP5.72□□□□□ -1.49
HDAC3-209ENST00000486618 GCSHP23434 173 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 SLC6A1P30531 599 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 CEACAM6P40199 344 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 RPL5P46777 297 aaKnown RBP5.72□□□□□ -1.49
HDAC3-209ENST00000486618 CSNK1A1P48729 337 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 EVX1P49640 407 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 RPL38P63173 70 aaKnown RBP5.72□□□□□ -1.49
HDAC3-209ENST00000486618 MRPS34P82930 218 aaKnown RBP5.72□□□□□ -1.49
HDAC3-209ENST00000486618 HGFACQ04756 655 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 DGUOKQ16854 277 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 RNF212Q495C1 297 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 OTUD3Q5T2D3 398 aaPredicted RBP5.72□□□□□ -1.49
HDAC3-209ENST00000486618 LIPKQ5VXJ0 399 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 PAQR6Q6TCH4 344 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 TIFABQ6ZNK6 161 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 SSX6Q7RTT6 188 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 OR2AK2Q8NG84 335 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 OR11H1Q8NG94 326 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 OR1K1Q8NGR3 316 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 OR14K1Q8NGZ2 314 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 OR11H2Q8NH07 326 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 SFXN5Q8TD22 340 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 C11orf40Q8WZ69 217 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 RDH5Q92781 318 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 MOB3AQ96BX8 217 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 DNAJA3Q96EY1 480 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 AURKBQ96GD4 344 aaPredicted RBP5.72□□□□□ -1.49
HDAC3-209ENST00000486618 POM121L2Q96KW2 1035 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 FCRL1Q96LA6 429 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 C8orf49Q96NF6 230 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 OR7D2Q96RA2 312 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 SDHCQ99643 169 aaPredicted RBP5.72□□□□□ -1.49
HDAC3-209ENST00000486618 EPYCQ99645 322 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 THAP7Q9BT49 309 aaPredicted RBP5.72□□□□□ -1.49
HDAC3-209ENST00000486618 OR11A1Q9GZK7 315 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 ARV1Q9H2C2 271 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms