RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 ERP29P30040 261 aaKnown RBP15.12■□□□□ 0.01
CCDC88B-206ENST00000473405 KPNB1Q14974 876 aaKnown RBP15.12■□□□□ 0.01
CCDC88B-206ENST00000473405 MINOS1Q5TGZ0 78 aa15.12■□□□□ 0.01
CCDC88B-206ENST00000473405 CBR4Q8N4T8 237 aa15.12■□□□□ 0.01
CCDC88B-206ENST00000473405 ACBD7Q8N6N7 88 aa15.12■□□□□ 0.01
CCDC88B-206ENST00000473405 OR13C3Q8NGS6 347 aa15.12■□□□□ 0.01
CCDC88B-206ENST00000473405 OR13C9Q8NGT0 318 aa15.12■□□□□ 0.01
CCDC88B-206ENST00000473405 C4orf36Q96KX1 117 aa15.12■□□□□ 0.01
CCDC88B-206ENST00000473405 CLEC7AQ9BXN2 247 aa15.12■□□□□ 0.01
CCDC88B-206ENST00000473405 HILPDAQ9Y5L2 63 aa15.12■□□□□ 0.01
CCDC88B-206ENST00000473405 MINOS1-NBL1R4GNA1 71 aa15.12■□□□□ 0.01
CCDC88B-206ENST00000473405 G3V4G9 280 aa15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 J3QLW9 94 aa15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 KDM4BO94953 1096 aa15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 OR2H2O95918 312 aa15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 ZNF19P17023 458 aa15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 BAIAP2L2Q6UXY1 529 aa15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 DTX3Q8N9I9 347 aa15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 OR5D18Q8NGL1 313 aa15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 OR4P4Q8NGL7 312 aa15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 COMMD4Q9H0A8 199 aa15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 PITPNC1Q9UKF7 332 aa15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 GSTK1Q9Y2Q3 226 aa15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 UBE2J1Q9Y385 318 aaPredicted RBP15.11■□□□□ 0.01
CCDC88B-206ENST00000473405 COL7A1Q02388 2944 aa15.1■□□□□ 0.01
CCDC88B-206ENST00000473405 F2RL2O00254 374 aa15.1■□□□□ 0.01
CCDC88B-206ENST00000473405 ALKBH1Q13686 389 aaKnown RBP15.1■□□□□ 0.01
CCDC88B-206ENST00000473405 ZFP1Q6P2D0 407 aa15.1■□□□□ 0.01
CCDC88B-206ENST00000473405 Q6ZS46 218 aa15.1■□□□□ 0.01
CCDC88B-206ENST00000473405 TRAPPC6BQ86SZ2 158 aa15.1■□□□□ 0.01
CCDC88B-206ENST00000473405 LYG1Q8N1E2 194 aa15.1■□□□□ 0.01
CCDC88B-206ENST00000473405 ZNF649Q9BS31 505 aa15.1■□□□□ 0.01
CCDC88B-206ENST00000473405 ALG8Q9BVK2 526 aa15.1■□□□□ 0.01
CCDC88B-206ENST00000473405 WNT10AQ9GZT5 417 aa15.1■□□□□ 0.01
CCDC88B-206ENST00000473405 ISG20L2Q9H9L3 353 aaKnown RBP15.1■□□□□ 0.01
CCDC88B-206ENST00000473405 EXOSC4Q9NPD3 245 aaKnown RBP15.1■□□□□ 0.01
CCDC88B-206ENST00000473405 A0A0G2JK05 382 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 FAM90A22PA8MWA6 464 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 FBXO24O75426 580 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 CD28P10747 220 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 DBTP11182 482 aaKnown RBP15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 LMO1P25800 156 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 BLCAPP62952 87 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 SLC34A1Q06495 639 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 GALEQ14376 348 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 BEAN1Q3B7T3 259 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 PRAMEF5Q5TYX0 476 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 LHFPL3Q86UP9 236 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 NDNFQ8TB73 568 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 PRSS22Q9GZN4 317 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 GLS2Q9UI32 602 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 MYRFQ9Y2G1 1151 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 GMPPBQ9Y5P6 360 aa15.09■□□□□ 0.01
CCDC88B-206ENST00000473405 ADARB2-AS1A8MUL3 147 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 SH2D1BO14796 132 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 ZFPL1O95159 310 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 CDK2P24941 298 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 GDNFP39905 211 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 GLIPR1P48060 266 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 ZP1P60852 638 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 TMEM95Q3KNT9 176 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 KPRPQ5T749 579 aaPredicted RBP15.08■□□□□ 0
CCDC88B-206ENST00000473405 SAMD5Q5TGI4 173 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 Q6P435 159 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 HEPN1Q6WQI6 88 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 ZBTB49Q6ZSB9 765 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 SAXO1Q8IYX7 474 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 SYS1Q8N2H4 156 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 CORO2AQ92828 525 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 COQ2Q96H96 371 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 GAL3ST2Q9H3Q3 398 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 ZCCHC4Q9H5U6 513 aa15.08■□□□□ 0
CCDC88B-206ENST00000473405 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.08■□□□□ 0
CCDC88B-206ENST00000473405 TRGV10A0A0A0MS01 117 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 FAM172BPA6NC97 362 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 SNTNA6NMZ2 147 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 E9PI62 339 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 IGLV1-47P01700 117 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 CSN2P05814 226 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 OCM2P0CE71 109 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 OCMP0CE72 109 aaPredicted RBP15.07■□□□□ 0
CCDC88B-206ENST00000473405 HTR1DP28221 377 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 BDH1Q02338 343 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 AESQ08117 197 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 CDK5R1Q15078 307 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 NSUN5P1Q3KNT7 163 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 FBLN7Q53RD9 439 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 ABHD12Q8N2K0 398 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 RHOXF1Q8NHV9 184 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 OR5M11Q96RB7 305 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 RHOFQ9HBH0 211 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 NEK6Q9HC98 313 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 ERVK13-1Q9NX77 482 aa15.07■□□□□ 0
CCDC88B-206ENST00000473405 ODAMA1E959 279 aa15.06■□□□□ 0
CCDC88B-206ENST00000473405 SLC33A1O00400 549 aaPredicted RBP15.06■□□□□ 0
CCDC88B-206ENST00000473405 SULT1B1O43704 296 aa15.06■□□□□ 0
CCDC88B-206ENST00000473405 ZNF44P15621 663 aa15.06■□□□□ 0
CCDC88B-206ENST00000473405 IL18R1Q13478 541 aa15.06■□□□□ 0
CCDC88B-206ENST00000473405 PARP16Q8N5Y8 322 aa15.06■□□□□ 0
CCDC88B-206ENST00000473405 CHST4Q8NCG5 386 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms