RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 AICDAQ9GZX7 198 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 LPAR5Q9H1C0 372 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 CST9LQ9H4G1 147 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 CALHM2Q9HA72 323 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 MANBALQ9NQG1 85 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 GPR84Q9NQS5 396 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 LYRM2Q9NU23 88 aaPredicted RBP3.7□□□□□ -1.82
VPS50-210ENST00000471188 AURKAIP1Q9NWT8 199 aaPredicted RBP3.7□□□□□ -1.82
VPS50-210ENST00000471188 LSM7Q9UK45 103 aaKnown RBP3.7□□□□□ -1.82
VPS50-210ENST00000471188 WIPI2Q9Y4P8 454 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 PHF3Q92576 2039 aaKnown RBP3.7□□□□□ -1.82
VPS50-210ENST00000471188 COL4A4P53420 1690 aaPredicted RBP3.7□□□□□ -1.82
VPS50-210ENST00000471188 KNL1Q8NG31 2342 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 A0A0U1RQV5 110 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 LOC102723971A0A1B0GUV8 181 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 MYADML2A6NDP7 307 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 HIDE1A8MVS5 230 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 ZNF814B7Z6K7 855 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 SSSCA1O60232 199 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 SLC16A7O60669 478 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 GOSR1O95249 250 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 PFN1P07737 140 aaKnown RBP3.7□□□□□ -1.82
VPS50-210ENST00000471188 RPS4Y1P22090 263 aaKnown RBP3.7□□□□□ -1.82
VPS50-210ENST00000471188 DUSP1P28562 367 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 ZNF93P35789 620 aaPredicted RBP3.7□□□□□ -1.82
VPS50-210ENST00000471188 RAB28P51157 221 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 DUSP3P51452 185 aaPredicted RBP3.7□□□□□ -1.82
VPS50-210ENST00000471188 FAM78BQ5VT40 261 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 KCNIP4Q6PIL6 250 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 CXCL17Q6UXB2 119 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 AMZ2Q86W34 360 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 SLC22A24Q8N4F4 322 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 CADM4Q8NFZ8 388 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 OR5AU1Q8NGC0 362 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 OR51G1Q8NGK1 321 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 OR5D18Q8NGL1 313 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 ABHD3Q8WU67 409 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 TNFRSF14Q92956 283 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 SPACA7Q96KW9 195 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 ZNF681Q96N22 645 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 MEGF9Q9H1U4 602 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 ZNF160Q9HCG1 818 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 UQCR10Q9UDW1 63 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 TUBD1Q9UJT1 453 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 COX11Q9Y6N1 276 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 CACNA1DQ01668 2161 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 A0A0G2JLL6 359 aaPredicted RBP3.69□□□□□ -1.82
VPS50-210ENST00000471188 ZNF850A8MQ14 1090 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 RNF212BA8MTL3 300 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 ADARB2-AS1A8MUL3 147 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 DIRC3C9JPN6 131 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 NPIPA2E9PIF3 369 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 TNFRSF10CO14798 259 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 ZNF217O75362 1048 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 VAMP5O95183 116 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 MPZL1O95297 269 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 CSTAP01040 98 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 HRASP01112 189 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 OPN1LWP04000 364 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 BCL2P10415 239 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 PSG1P11464 419 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 HIST1H1DP16402 221 aaKnown RBP3.69□□□□□ -1.82
VPS50-210ENST00000471188 TNFSF4P23510 183 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 CST5P28325 142 aaPredicted RBP3.69□□□□□ -1.82
VPS50-210ENST00000471188 PDLIM4P50479 330 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 TAS2R46P59540 309 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 NTHL1P78549 312 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 HSF1Q00613 529 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 TLE3Q04726 772 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 DMWDQ09019 674 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 FOXF1Q12946 379 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 ARL6IP1Q15041 203 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 SHHQ15465 462 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 DEFB134Q4QY38 66 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 PLAC9Q5JTB6 97 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 TPTE2P1Q5T6R2 138 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 OR4A47Q6IF82 309 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 Q6ZWC4 215 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 PRRT2Q7Z6L0 340 aaPredicted RBP3.69□□□□□ -1.82
VPS50-210ENST00000471188 TGIF2LYQ8IUE0 185 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 LINC00346Q8IVM7 164 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 TMEFF1Q8IYR6 380 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 FBXL14Q8N1E6 418 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 D2HGDHQ8N465 521 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 CDRT4Q8N9R6 151 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 OR51T1Q8NGJ9 327 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 CYB5D2Q8WUJ1 264 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 GNPNAT1Q96EK6 184 aaPredicted RBP3.69□□□□□ -1.82
VPS50-210ENST00000471188 SMIM12Q96EX1 92 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 ABHD6Q9BV23 337 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 KLHL13Q9P2N7 655 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 HSPB7Q9UBY9 170 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 NAT8Q9UHE5 227 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 NXT1Q9UKK6 140 aaKnown RBP3.69□□□□□ -1.82
VPS50-210ENST00000471188 CES1P1Q9UKY3 287 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 LRP12Q9Y561 859 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 TCF20Q9UGU0 1960 aaKnown RBP3.69□□□□□ -1.82
VPS50-210ENST00000471188 NUP210LQ5VU65 1888 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 TRAV39A0A0B4J263 110 aa3.69□□□□□ -1.82
VPS50-210ENST00000471188 LINC01553A4QN01 128 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms