RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 OR11H4Q8NGC9 324 aa22.53■■□□□ 1.2
LDB1-202ENST00000425280 OR2T35Q8NGX2 323 aa22.53■■□□□ 1.2
LDB1-202ENST00000425280 C5orf66Q9H5L9 145 aa22.53■■□□□ 1.2
LDB1-202ENST00000425280 TLN1Q9Y490 2541 aaKnown RBP22.52■■□□□ 1.2
LDB1-202ENST00000425280 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.52■■□□□ 1.2
LDB1-202ENST00000425280 FAM172BPA6NC97 362 aa22.52■■□□□ 1.2
LDB1-202ENST00000425280 OR5H14A6NHG9 310 aa22.52■■□□□ 1.2
LDB1-202ENST00000425280 GOSR2O14653 212 aa22.52■■□□□ 1.2
LDB1-202ENST00000425280 GRPP07492 148 aa22.52■■□□□ 1.2
LDB1-202ENST00000425280 AKR1C4P17516 323 aa22.52■■□□□ 1.2
LDB1-202ENST00000425280 ERVK11-1P61568 191 aa22.52■■□□□ 1.2
LDB1-202ENST00000425280 MSMPQ1L6U9 139 aa22.52■■□□□ 1.2
LDB1-202ENST00000425280 RGS7BPQ6MZT1 257 aaPredicted RBP22.52■■□□□ 1.2
LDB1-202ENST00000425280 ELOVL5Q9NYP7 299 aa22.52■■□□□ 1.2
LDB1-202ENST00000425280 G3V3Q6 166 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 SIX6O95475 246 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 CRYAAP02489 173 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 C1QTNF12Q5T7M4 302 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 LAMTOR1Q6IAA8 161 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 WDR89Q96FK6 387 aaPredicted RBP22.51■■□□□ 1.19
LDB1-202ENST00000425280 CXXC4Q9H2H0 198 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 ZNF286AQ9HBT8 521 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 NECAP2Q9NVZ3 263 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 JKAMPQ9P055 326 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 C9orf170A2RU37 121 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 PGA5P0DJD9 388 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 H2BFSP57053 126 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 SLC22A25Q6T423 547 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 Q8IYB0 196 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 SCGB3A2Q96PL1 93 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 MSL2Q9HCI7 577 aa22.51■■□□□ 1.19
LDB1-202ENST00000425280 F5H5P2 479 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 OR5H8P0DN80 308 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 DNASE1P24855 282 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 ID4P47928 161 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 TAS2R31P59538 309 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 BAMBIQ13145 260 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 Q5BKY6 102 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 ZNF660Q6AZW8 331 aaPredicted RBP22.5■■□□□ 1.19
LDB1-202ENST00000425280 SUMF2Q8NBJ7 301 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 TMEM185AQ8NFB2 350 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 NRIP2Q9BQI9 281 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 ZNF2Q9BSG1 426 aaPredicted RBP22.5■■□□□ 1.19
LDB1-202ENST00000425280 SPACA1Q9HBV2 294 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 CHMP1AQ9HD42 196 aaPredicted RBP22.5■■□□□ 1.19
LDB1-202ENST00000425280 MGAT4AQ9UM21 535 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 MCRIP1C9JLW8 97 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 HSPB6O14558 160 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 RAP2BP61225 183 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 KLRB1Q12918 225 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 RTBDNQ9BSG5 229 aaPredicted RBP22.5■■□□□ 1.19
LDB1-202ENST00000425280 SPEF1Q9Y4P9 236 aa22.5■■□□□ 1.19
LDB1-202ENST00000425280 TRAV24A0A0B4J272 114 aa22.49■■□□□ 1.19
LDB1-202ENST00000425280 A0A1B0GWJ7 208 aa22.49■■□□□ 1.19
LDB1-202ENST00000425280 SLC22A5O76082 557 aa22.49■■□□□ 1.19
LDB1-202ENST00000425280 NAPSAO96009 420 aa22.49■■□□□ 1.19
LDB1-202ENST00000425280 CD34P28906 385 aa22.49■■□□□ 1.19
LDB1-202ENST00000425280 NKX6-1P78426 367 aaPredicted RBP22.49■■□□□ 1.19
LDB1-202ENST00000425280 IL13RA1P78552 427 aa22.49■■□□□ 1.19
LDB1-202ENST00000425280 TMEM230Q96A57 120 aa22.49■■□□□ 1.19
LDB1-202ENST00000425280 IFT22Q9H7X7 185 aa22.49■■□□□ 1.19
LDB1-202ENST00000425280 C16orf97H3BN30 126 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 PI3P19957 117 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 MPPED2Q15777 294 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 DCAF12L2Q5VW00 463 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 LRP11Q86VZ4 500 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 C11orf53Q8IXP5 236 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 C9orf62Q8N4C0 152 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 NEK7Q8TDX7 302 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 LIME1Q9H400 295 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 ZNF250P15622 560 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 VAMP1P23763 118 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 DHODHQ02127 395 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 SURF2Q15527 256 aaPredicted RBP22.48■■□□□ 1.19
LDB1-202ENST00000425280 Q6P435 159 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 DMRTA2Q96SC8 542 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 TMEM246Q9BRR3 403 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 WDR13Q9H1Z4 485 aa22.48■■□□□ 1.19
LDB1-202ENST00000425280 HS3ST1O14792 307 aa22.47■■□□□ 1.19
LDB1-202ENST00000425280 ACAA1P09110 424 aaPredicted RBP22.47■■□□□ 1.19
LDB1-202ENST00000425280 GLRXP35754 106 aa22.47■■□□□ 1.19
LDB1-202ENST00000425280 TMEM128Q5BJH2 165 aa22.47■■□□□ 1.19
LDB1-202ENST00000425280 C11orf88Q6PI97 169 aa22.47■■□□□ 1.19
LDB1-202ENST00000425280 DHRS11Q6UWP2 260 aa22.47■■□□□ 1.19
LDB1-202ENST00000425280 SPERTQ8NA61 448 aa22.47■■□□□ 1.19
LDB1-202ENST00000425280 MITD1Q8WV92 249 aa22.47■■□□□ 1.19
LDB1-202ENST00000425280 GSTT2P0CG29 244 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 Q6ZS49 121 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 GRPEL2Q8TAA5 225 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 RDH5Q92781 318 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 VKORC1Q9BQB6 163 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 DPCDQ9BVM2 203 aaPredicted RBP22.46■■□□□ 1.19
LDB1-202ENST00000425280 TLNRD1Q9H1K6 362 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 Q9N2K0 584 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 OPN4Q9UHM6 478 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 DUSP13Q9UII6 198 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 PAIP2BQ9ULR5 123 aaKnown RBP22.46■■□□□ 1.19
LDB1-202ENST00000425280 HSPB11Q9Y547 144 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 ATP6V1G2-DDX39BF2Z307 99 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 DEGS1O15121 323 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms