RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 RPL31P62899 125 aaKnown RBP13.01□□□□□ -0.33
BRAT1-202ENST00000421712 BLMHQ13867 455 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 GPR176Q14439 515 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 GRK1Q15835 563 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 ELP2Q6IA86 826 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 GLIPR1L1Q6UWM5 242 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 CDH26Q8IXH8 852 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 LY6G5BQ8NDX9 201 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 PHYHIPQ92561 330 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 FOXRED1Q96CU9 486 aaPredicted RBP13.01□□□□□ -0.33
BRAT1-202ENST00000421712 WDFY2Q96P53 400 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 OCEL1Q9H607 264 aa13.01□□□□□ -0.33
BRAT1-202ENST00000421712 NIPBLQ6KC79 2804 aaeCLIP13.01□□□□□ -0.33
BRAT1-202ENST00000421712 A0A087WXM4 84 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 TRBV23-1A0A0A0MS06 115 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 A0A1W2PPH5 198 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 TMEM82A0PJX8 343 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 ZNF780AO75290 641 aaPredicted RBP13□□□□□ -0.33
BRAT1-202ENST00000421712 GP2P55259 537 aaKnown RBP13□□□□□ -0.33
BRAT1-202ENST00000421712 ASCL4Q6XD76 172 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 LRRTM1Q86UE6 522 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 OR8H2Q8N162 312 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 OSR2Q8N2R0 312 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 TSPAN14Q8NG11 270 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 C8orf46Q8TAG6 207 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 POM121Q96HA1 1249 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 UQCC2Q9BRT2 126 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 SEBOXQ9HB31 216 aaPredicted RBP13□□□□□ -0.33
BRAT1-202ENST00000421712 VCX3AQ9NNX9 186 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 C19orf12Q9NSK7 152 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 NDUFB11Q9NX14 153 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 NUP50Q9UKX7 468 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 ST3GAL6Q9Y274 331 aa13□□□□□ -0.33
BRAT1-202ENST00000421712 ZFHX3Q15911 3703 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 SETD2Q9BYW2 2564 aaPredicted RBP12.99□□□□□ -0.33
BRAT1-202ENST00000421712 TRAV40A0A0B4J280 105 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 PSPNO60542 156 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 ZNF737O75373 536 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 GTF2F2P13984 249 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 EPHA1P21709 976 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 FPR2P25090 351 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 PIGYQ3MUY2 71 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 GPR157Q5UAW9 335 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 C17orf107Q6ZR85 190 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 OR4S1Q8NGB4 309 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 OR4D6Q8NGJ1 314 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 TBC1D15Q8TC07 691 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 C22orf15Q8WYQ4 148 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 UPRTQ96BW1 309 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 MS4A7Q9GZW8 240 aaPredicted RBP12.99□□□□□ -0.33
BRAT1-202ENST00000421712 PPA2Q9H2U2 334 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 ING3Q9NXR8 418 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 IL36GQ9NZH8 169 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 AK6Q9Y3D8 172 aaKnown RBP12.99□□□□□ -0.33
BRAT1-202ENST00000421712 KPTNQ9Y664 436 aa12.99□□□□□ -0.33
BRAT1-202ENST00000421712 A0A0G2JK05 382 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 HSPB6O14558 160 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 MGST3O14880 152 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 CRTAPO75718 401 aaPredicted RBP12.98□□□□□ -0.33
BRAT1-202ENST00000421712 MYL9P24844 172 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 IL13RA2Q14627 380 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 TMEM200BQ69YZ2 307 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 Q6P435 159 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 VMO1Q7Z5L0 202 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 BPIFB2Q8N4F0 458 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 CHST4Q8NCG5 386 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 OR51T1Q8NGJ9 327 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 LHX4Q969G2 390 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 DMRTB1Q96MA1 342 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 BANF2Q9H503 90 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 PLGRKTQ9HBL7 147 aa12.98□□□□□ -0.33
BRAT1-202ENST00000421712 TRDV1A0A1B0GX56 115 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 A0A1W2PP11 408 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 MEX3AA1L020 520 aaKnown RBP12.97□□□□□ -0.33
BRAT1-202ENST00000421712 FUOMA2VDF0 154 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 SLC33A1O00400 549 aaPredicted RBP12.97□□□□□ -0.33
BRAT1-202ENST00000421712 OR7C1O76099 320 aaPredicted RBP12.97□□□□□ -0.33
BRAT1-202ENST00000421712 IGHV4-38-2P0DP08 117 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 LMO1P25800 156 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 OR3A1P47881 315 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 RBM11P57052 281 aaKnown RBP12.97□□□□□ -0.33
BRAT1-202ENST00000421712 PAN3Q58A45 887 aaKnown RBP12.97□□□□□ -0.33
BRAT1-202ENST00000421712 KLF17Q5JT82 389 aaPredicted RBP12.97□□□□□ -0.33
BRAT1-202ENST00000421712 C22orf42Q6IC83 251 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 PRIMA1Q86XR5 153 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 PDZD9Q8IXQ8 264 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 KIR3DL3Q8N743 410 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 TPRX1Q8N7U7 411 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 Q8NFD4 153 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 TBX15Q96SF7 602 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 SIRPDQ9H106 197 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 SIRT7Q9NRC8 400 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 GHRLQ9UBU3 117 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 SSR3Q9UNL2 185 aa12.97□□□□□ -0.33
BRAT1-202ENST00000421712 NAV3Q8IVL0 2385 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 SVEP1Q4LDE5 3571 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 hCG_1809904A0A1W2PP81 198 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 A0A1W2PPE2 198 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 A0A1W2PR64 198 aa12.96□□□□□ -0.33
BRAT1-202ENST00000421712 A0A1W2PRV1 198 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms