RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ST3GAL6Q9Y274 331 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 DSPP15924 2871 aaKnown RBP4.69□□□□□ -1.66
EPHA4-202ENST00000409854 ITPR1Q14643 2758 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 C7orf66A4D0T2 115 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 LINC00862A6NCI5 91 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 F8VVB4 439 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 F8VWA3 439 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 INMT-MINDY4F8WBC2 141 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 H0YL77 283 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 GEMIN2O14893 280 aaKnown RBP4.69□□□□□ -1.66
EPHA4-202ENST00000409854 NDUFB6O95139 128 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 CYB5AP00167 134 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 GABRR1P24046 479 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 S100PP25815 95 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 HLA-DMAP28067 261 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 CD300CQ08708 224 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 IL13RA2Q14627 380 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 OR8G1Q15617 311 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 FAAP20Q6NZ36 180 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 HAGHLQ6PII5 290 aaPredicted RBP4.69□□□□□ -1.66
EPHA4-202ENST00000409854 SCCPDHQ8NBX0 429 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 GTF3AQ92664 365 aaKnown RBP4.69□□□□□ -1.66
EPHA4-202ENST00000409854 SNAPC3Q92966 411 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 EMG1Q92979 244 aaKnown RBP4.69□□□□□ -1.66
EPHA4-202ENST00000409854 FBXW5Q969U6 566 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 C20orf85Q9H1P6 137 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 PLK3Q9H4B4 646 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 NPDC1Q9NQX5 325 aaPredicted RBP4.69□□□□□ -1.66
EPHA4-202ENST00000409854 ING3Q9NXR8 418 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF581Q9P0T4 197 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 PLEKHA6Q9Y2H5 1048 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.69□□□□□ -1.66
EPHA4-202ENST00000409854 DPRXA6NFQ7 191 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 TRAPPC2LH3BP13 241 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 ABCD4O14678 606 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 TIMM8AO60220 97 aaPredicted RBP4.69□□□□□ -1.66
EPHA4-202ENST00000409854 PDCD6O75340 191 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 IFNA4P05014 189 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 SMIM6P0DI80 62 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 PGA5P0DJD9 388 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 CD200P41217 278 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 FABP6P51161 128 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF154Q13106 437 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 MEF2DQ14814 521 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 ZMYND11Q15326 602 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 TAF9Q16594 264 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 TATDN3Q17R31 274 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 LIN54Q6MZP7 749 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 TMEM108Q6UXF1 575 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 C6orf201Q7Z4U5 140 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 HOGA1Q86XE5 327 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 C11orf53Q8IXP5 236 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 Q8IYB0 196 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 GVQW1Q8N7I0 195 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 OR56B4Q8NH76 319 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 RNASE6Q93091 150 aaKnown RBP4.69□□□□□ -1.66
EPHA4-202ENST00000409854 NRIP2Q9BQI9 281 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 CXXC4Q9H2H0 198 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF442Q9H7R0 627 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 HES4Q9HCC6 221 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 C19orf12Q9NSK7 152 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 POLDIP2Q9Y2S7 368 aa4.69□□□□□ -1.66
EPHA4-202ENST00000409854 TLN1Q9Y490 2541 aaKnown RBP4.68□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF736B4DX44 427 aaPredicted RBP4.68□□□□□ -1.66
EPHA4-202ENST00000409854 RHBDL1O75783 438 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 RAB3DO95716 219 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 GLAP06280 429 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 DTYMKP23919 212 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 MEOX2P50222 304 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 SORDQ00796 357 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 MAB21L1Q13394 359 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 RBMS2Q15434 407 aaKnown RBP4.68□□□□□ -1.66
EPHA4-202ENST00000409854 IGFBP7Q16270 282 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 ACTBL2Q562R1 376 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 VAX1Q5SQQ9 334 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 RSBN1Q5VWQ0 802 aaPredicted RBP4.68□□□□□ -1.66
EPHA4-202ENST00000409854 SFRP4Q6FHJ7 346 aaPredicted RBP4.68□□□□□ -1.66
EPHA4-202ENST00000409854 C1orf122Q6ZSJ8 110 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 LRP11Q86VZ4 500 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 OR13G1Q8NGZ3 307 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 WFIKKN1Q96NZ8 548 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 HS3ST6Q96QI5 342 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 SULT4A1Q9BR01 284 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF251Q9BRH9 671 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 UNKLQ9H9P5 680 aaKnown RBP4.68□□□□□ -1.66
EPHA4-202ENST00000409854 ALG5Q9Y673 324 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 A8MV72 311 aaPredicted RBP4.68□□□□□ -1.66
EPHA4-202ENST00000409854 H2AFB2P0C5Z0 115 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 FUT3P21217 361 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 KLF3P57682 345 aaPredicted RBP4.68□□□□□ -1.66
EPHA4-202ENST00000409854 MZT1Q08AG7 82 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 ETV3LQ6ZN32 361 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 FAM58AQ8N1B3 248 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 POC1AQ8NBT0 407 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 OR4S1Q8NGB4 309 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 FAM216AQ8WUB2 273 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 MRPL24Q96A35 216 aaKnown RBP4.68□□□□□ -1.66
EPHA4-202ENST00000409854 TINAGL1Q9GZM7 467 aaPredicted RBP4.68□□□□□ -1.66
EPHA4-202ENST00000409854 CHST6Q9GZX3 395 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 PLEKHJ1Q9NW61 149 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms