RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 CCDC107Q8WV48 283 aa14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 TMEM171Q8WVE6 324 aa14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 GTF3AQ92664 365 aaKnown RBP14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 USB1Q9BQ65 265 aaKnown RBP14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 CA10Q9NS85 328 aa14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 OSGIN2Q9Y236 505 aa14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 NPTNQ9Y639 398 aa14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 TPD52L2O43399 206 aaKnown RBP14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 C1QBP02746 253 aa14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 NPY4RP50391 375 aa14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 LY6DQ14210 128 aa14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 CDK10Q15131 360 aa14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 SLC25A42Q86VD7 318 aa14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 ZNF431Q8TF32 576 aaPredicted RBP14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 DUSP13Q9UII6 198 aa14.72□□□□□ -0.05
THUMPD2-201ENST00000378727 TRAV24A0A0B4J272 114 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 MED19A0JLT2 244 aaPredicted RBP14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 HSPB6O14558 160 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 FABP7O15540 132 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 IGHV3-13P01766 116 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 MPPED2Q15777 294 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 Q6P435 159 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 VHLLQ6RSH7 139 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 ZNF826PQ6ZT77 177 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 Q8IYB0 196 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 SPICQ8N5J4 248 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 SUMF2Q8NBJ7 301 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 ADAD2Q8NCV1 583 aaKnown RBP14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 TLNRD1Q9H1K6 362 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 MGAT4CQ9UBM8 478 aa14.71□□□□□ -0.05
THUMPD2-201ENST00000378727 CASP6P55212 293 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 ARPC4P59998 168 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 C2orf68Q2NKX9 166 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 PRAMEF6Q5VXH4 476 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 TMEM17Q86X19 198 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 WFDC8Q8IUA0 241 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 ZNF436Q9C0F3 470 aaPredicted RBP14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 IFT22Q9H7X7 185 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 GPR132Q9UNW8 380 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 OR5H14A6NHG9 310 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 NAPSAO96009 420 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 ACAA1P09110 424 aaPredicted RBP14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 GZMKP49863 264 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 GMFBP60983 142 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 DHRS2Q13268 280 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 GRK1Q15835 563 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 ZNF660Q6AZW8 331 aaPredicted RBP14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 PEG10Q86TG7 708 aaKnown RBP14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 SPERTQ8NA61 448 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 ZNF486Q96H40 463 aaPredicted RBP14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 SYT3Q9BQG1 590 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 LIME1Q9H400 295 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 SPACA1Q9HBV2 294 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 HES4Q9HCC6 221 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 DLL4Q9NR61 685 aa14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 CHD3Q12873 2000 aaKnown RBP14.7□□□□□ -0.06
THUMPD2-201ENST00000378727 ITPR1Q14643 2758 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 IGLV3-9A0A075B6K5 115 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 MCRIP1C9JLW8 97 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 H3BUI4 141 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 HS3ST1O14792 307 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 NOS1APO75052 506 aaPredicted RBP14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 ZBTB25P24278 435 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 KLF3P57682 345 aaPredicted RBP14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 PPP1R1AQ13522 171 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 SLC22A25Q6T423 547 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 NLRC3Q7RTR2 1065 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 POC1AQ8NBT0 407 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 OR2AK2Q8NG84 335 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 RDH5Q92781 318 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 C5orf66Q9H5L9 145 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 PLCE1Q9P212 2302 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 DPRXA6NFQ7 191 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 ZSCAN5BA6NJL1 495 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 ATXN7O15265 892 aaPredicted RBP14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 NXPH2O95156 264 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 OR5H8P0DN80 308 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 HOXA4Q00056 320 aaPredicted RBP14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 TMEM108Q6UXF1 575 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 WDR82Q6UXN9 313 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 KDF1Q8NAX2 398 aaPredicted RBP14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 OR2Z1Q8NG97 314 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 TRAF4Q9BUZ4 470 aaPredicted RBP14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 DPCDQ9BVM2 203 aaPredicted RBP14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 ZNF286AQ9HBT8 521 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 UFSP2Q9NUQ7 469 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 NECAP2Q9NVZ3 263 aa14.69□□□□□ -0.06
THUMPD2-201ENST00000378727 DEGS1O15121 323 aa14.68□□□□□ -0.06
THUMPD2-201ENST00000378727 FPR2P25090 351 aa14.68□□□□□ -0.06
THUMPD2-201ENST00000378727 PTAFRP25105 342 aa14.68□□□□□ -0.06
THUMPD2-201ENST00000378727 BAMBIQ13145 260 aa14.68□□□□□ -0.06
THUMPD2-201ENST00000378727 PCSK4Q6UW60 755 aa14.68□□□□□ -0.06
THUMPD2-201ENST00000378727 UXS1Q8NBZ7 420 aa14.68□□□□□ -0.06
THUMPD2-201ENST00000378727 NEK7Q8TDX7 302 aa14.68□□□□□ -0.06
THUMPD2-201ENST00000378727 ZNF2Q9BSG1 426 aaPredicted RBP14.68□□□□□ -0.06
THUMPD2-201ENST00000378727 RTBDNQ9BSG5 229 aaPredicted RBP14.68□□□□□ -0.06
THUMPD2-201ENST00000378727 MRPL37Q9BZE1 423 aaKnown RBP14.68□□□□□ -0.06
THUMPD2-201ENST00000378727 WDR13Q9H1Z4 485 aa14.68□□□□□ -0.06
THUMPD2-201ENST00000378727 CHMP1AQ9HD42 196 aaPredicted RBP14.68□□□□□ -0.06
THUMPD2-201ENST00000378727 PIPOXQ9P0Z9 390 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms