RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RCC1LQ96I51 464 aaKnown RBP16.24■□□□□ 0.19
SCARF1-202ENST00000348987 BOD1Q96IK1 185 aa16.24■□□□□ 0.19
SCARF1-202ENST00000348987 B3GALT1Q9Y5Z6 326 aa16.24■□□□□ 0.19
SCARF1-202ENST00000348987 JMJD7P0C870 316 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 TMEM225BP0DP42 221 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 DUSP1P28562 367 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 ECI1P42126 302 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 HNRNPKP61978 463 aaKnown RBP eCLIP16.23■□□□□ 0.19
SCARF1-202ENST00000348987 ABCA11PQ4W5N1 156 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 ZNF880Q6PDB4 577 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 CPEB2Q7Z5Q1 589 aaKnown RBP16.23■□□□□ 0.19
SCARF1-202ENST00000348987 HAS2Q92819 552 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 NAA60Q9H7X0 242 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 FGF21Q9NSA1 209 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 NXT1Q9UKK6 140 aaKnown RBP16.23■□□□□ 0.19
SCARF1-202ENST00000348987 TCFL5Q9UL49 500 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 HSF4Q9ULV5 492 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 FXYD4P59646 89 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 ZNF506Q5JVG8 444 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 SLC38A9Q8NBW4 561 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 OR14L1PQ8NHC6 308 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 ELL3Q9HB65 397 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-202ENST00000348987 SLC7A11Q9UPY5 501 aa16.23■□□□□ 0.19
SCARF1-202ENST00000348987 A0A1B0GX78 115 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 FAM230AA0A1W2PPH8 454 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 SERPINE3A8MV23 424 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 PNLIPP16233 465 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 GABRR1P24046 479 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 CD200P41217 278 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 NOVA1P51513 510 aaKnown RBP16.22■□□□□ 0.19
SCARF1-202ENST00000348987 RRADP55042 308 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 GNMTQ14749 295 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 KISS1Q15726 138 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 NKAIN1Q4KMZ8 207 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 D2HGDHQ8N465 521 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 OR5L1Q8NGL2 311 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 CLDND2Q8NHS1 167 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 TMEM171Q8WVE6 324 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 SNHG12Q9BXW3 62 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 ACTR3CQ9C0K3 210 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-202ENST00000348987 METTL9Q9H1A3 318 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 STMND1H3BQB6 276 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 CLDN34H7C241 214 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 SFTPDP35247 375 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 ZNF121P58317 390 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-202ENST00000348987 ZNF266Q14584 549 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 OR2C3Q8N628 320 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 OR4X1Q8NH49 305 aa16.22■□□□□ 0.19
SCARF1-202ENST00000348987 RNASEH2CQ8TDP1 164 aaKnown RBP16.22■□□□□ 0.19
SCARF1-202ENST00000348987 PHF7Q9BWX1 381 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-202ENST00000348987 ZNF43P17038 809 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 OR8G5Q8NG78 346 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 C18orf12Q96KH6 178 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 DECR2Q9NUI1 292 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 IGSF23A1L1A6 192 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 FAM221AA4D161 298 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 MSTNO14793 375 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 EFNA2O43921 213 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 PIAS2O75928 621 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 ONECUT2O95948 504 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 ZNF728P0DKX0 622 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 NXPH1P58417 271 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 RUNX1Q01196 453 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 TLE3Q04726 772 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 CRIP3Q6Q6R5 217 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 LIAT1Q6ZQX7 453 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 THOC3Q96J01 351 aaKnown RBP16.21■□□□□ 0.19
SCARF1-202ENST00000348987 PLEKHJ1Q9NW61 149 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 ANXA10Q9UJ72 324 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 POLR1DQ9Y2S0 133 aa16.21■□□□□ 0.19
SCARF1-202ENST00000348987 ZNF850A8MQ14 1090 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 OPRM1P35372 400 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 RAB11AP62491 216 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 HSF1Q00613 529 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 FOXF1Q12946 379 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 SP5Q6BEB4 398 aaPredicted RBP16.2■□□□□ 0.18
SCARF1-202ENST00000348987 H1FNTQ75WM6 255 aaPredicted RBP16.2■□□□□ 0.18
SCARF1-202ENST00000348987 SLC25A45Q8N413 288 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 SUMF1Q8NBK3 374 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 ZNF501Q96CX3 271 aaPredicted RBP16.2■□□□□ 0.18
SCARF1-202ENST00000348987 LIN37Q96GY3 246 aaPredicted RBP16.2■□□□□ 0.18
SCARF1-202ENST00000348987 CABLES2Q9BTV7 478 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 CELSR3Q9NYQ7 3312 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 B4DEV8 164 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 RRP8O43159 456 aaKnown RBP16.2■□□□□ 0.18
SCARF1-202ENST00000348987 PGA3P0DJD8 388 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 ZNF25P17030 456 aaPredicted RBP16.2■□□□□ 0.18
SCARF1-202ENST00000348987 RND2P52198 227 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 H3F3AP84243 136 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 PLXDC1Q8IUK5 500 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 TMEM123Q8N131 208 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 SSC4DQ8WTU2 575 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 UBE2ZQ9H832 354 aaPredicted RBP16.2■□□□□ 0.18
SCARF1-202ENST00000348987 DKKL1Q9UK85 242 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 LHFPL6Q9Y693 200 aa16.2■□□□□ 0.18
SCARF1-202ENST00000348987 DAP3P51398 398 aaKnown RBP16.19■□□□□ 0.18
SCARF1-202ENST00000348987 TAF9Q16594 264 aa16.19■□□□□ 0.18
SCARF1-202ENST00000348987 OR11L1Q8NGX0 322 aa16.19■□□□□ 0.18
SCARF1-202ENST00000348987 MSI2Q96DH6 328 aaKnown RBP16.19■□□□□ 0.18
SCARF1-202ENST00000348987 CDAP32320 146 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms