RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 OR13C9Q8NGT0 318 aa20.29■□□□□ 0.84
U2AF1-201ENST00000291552 C4orf36Q96KX1 117 aa20.29■□□□□ 0.84
U2AF1-201ENST00000291552 TMEM133Q9H2Q1 129 aa20.29■□□□□ 0.84
U2AF1-201ENST00000291552 HHLA2Q9UM44 414 aa20.29■□□□□ 0.84
U2AF1-201ENST00000291552 MINOS1-NBL1R4GNA1 71 aa20.29■□□□□ 0.84
U2AF1-201ENST00000291552 J3QLW9 94 aa20.28■□□□□ 0.84
U2AF1-201ENST00000291552 OR2H2O95918 312 aa20.28■□□□□ 0.84
U2AF1-201ENST00000291552 MT-ND2P03891 347 aa20.28■□□□□ 0.84
U2AF1-201ENST00000291552 CD28P10747 220 aa20.28■□□□□ 0.84
U2AF1-201ENST00000291552 ZNF19P17023 458 aa20.28■□□□□ 0.84
U2AF1-201ENST00000291552 ERP29P30040 261 aaKnown RBP20.28■□□□□ 0.84
U2AF1-201ENST00000291552 BEAN1Q3B7T3 259 aa20.28■□□□□ 0.84
U2AF1-201ENST00000291552 MEDAGQ5VYS4 303 aa20.28■□□□□ 0.84
U2AF1-201ENST00000291552 ACBD7Q8N6N7 88 aa20.28■□□□□ 0.84
U2AF1-201ENST00000291552 OR5D18Q8NGL1 313 aa20.28■□□□□ 0.84
U2AF1-201ENST00000291552 OR4P4Q8NGL7 312 aa20.28■□□□□ 0.84
U2AF1-201ENST00000291552 GSTK1Q9Y2Q3 226 aa20.28■□□□□ 0.84
U2AF1-201ENST00000291552 KDM4BO94953 1096 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 CYB5AP00167 134 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 GDNFP39905 211 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 ALKBH1Q13686 389 aaKnown RBP20.27■□□□□ 0.84
U2AF1-201ENST00000291552 TMEM95Q3KNT9 176 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 PRAMEF5Q5TYX0 476 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 CBR4Q8N4T8 237 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 OR13C3Q8NGS6 347 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 ZNF649Q9BS31 505 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 CLEC7AQ9BXN2 247 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 WNT10AQ9GZT5 417 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 COMMD4Q9H0A8 199 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 EXOSC4Q9NPD3 245 aaKnown RBP20.27■□□□□ 0.84
U2AF1-201ENST00000291552 PITPNC1Q9UKF7 332 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 UBE2J1Q9Y385 318 aaPredicted RBP20.27■□□□□ 0.84
U2AF1-201ENST00000291552 ORC6Q9Y5N6 252 aa20.27■□□□□ 0.84
U2AF1-201ENST00000291552 ADARB2-AS1A8MUL3 147 aa20.26■□□□□ 0.83
U2AF1-201ENST00000291552 FAM90A22PA8MWA6 464 aa20.26■□□□□ 0.83
U2AF1-201ENST00000291552 F2RL2O00254 374 aa20.26■□□□□ 0.83
U2AF1-201ENST00000291552 FBLN7Q53RD9 439 aa20.26■□□□□ 0.83
U2AF1-201ENST00000291552 SAMD5Q5TGI4 173 aa20.26■□□□□ 0.83
U2AF1-201ENST00000291552 NDNFQ8TB73 568 aa20.26■□□□□ 0.83
U2AF1-201ENST00000291552 ISG20L2Q9H9L3 353 aaKnown RBP20.26■□□□□ 0.83
U2AF1-201ENST00000291552 MYRFQ9Y2G1 1151 aa20.26■□□□□ 0.83
U2AF1-201ENST00000291552 A0A0G2JK05 382 aa20.25■□□□□ 0.83
U2AF1-201ENST00000291552 FBXO24O75426 580 aa20.25■□□□□ 0.83
U2AF1-201ENST00000291552 GLIPR1P48060 266 aa20.25■□□□□ 0.83
U2AF1-201ENST00000291552 BLCAPP62952 87 aa20.25■□□□□ 0.83
U2AF1-201ENST00000291552 SLC34A1Q06495 639 aa20.25■□□□□ 0.83
U2AF1-201ENST00000291552 KPRPQ5T749 579 aaPredicted RBP20.25■□□□□ 0.83
U2AF1-201ENST00000291552 Q6P435 159 aa20.25■□□□□ 0.83
U2AF1-201ENST00000291552 TRAPPC6BQ86SZ2 158 aa20.25■□□□□ 0.83
U2AF1-201ENST00000291552 LHFPL3Q86UP9 236 aa20.25■□□□□ 0.83
U2AF1-201ENST00000291552 DTX3Q8N9I9 347 aa20.25■□□□□ 0.83
U2AF1-201ENST00000291552 ALG8Q9BVK2 526 aa20.25■□□□□ 0.83
U2AF1-201ENST00000291552 E9PI62 339 aa20.24■□□□□ 0.83
U2AF1-201ENST00000291552 DBTP11182 482 aaKnown RBP20.24■□□□□ 0.83
U2AF1-201ENST00000291552 LMO1P25800 156 aa20.24■□□□□ 0.83
U2AF1-201ENST00000291552 ZP1P60852 638 aa20.24■□□□□ 0.83
U2AF1-201ENST00000291552 GALEQ14376 348 aa20.24■□□□□ 0.83
U2AF1-201ENST00000291552 NSUN5P1Q3KNT7 163 aa20.24■□□□□ 0.83
U2AF1-201ENST00000291552 UTF1Q5T230 341 aa20.24■□□□□ 0.83
U2AF1-201ENST00000291552 COQ2Q96H96 371 aa20.24■□□□□ 0.83
U2AF1-201ENST00000291552 PRSS22Q9GZN4 317 aa20.24■□□□□ 0.83
U2AF1-201ENST00000291552 GMPPBQ9Y5P6 360 aa20.24■□□□□ 0.83
U2AF1-201ENST00000291552 FAM172BPA6NC97 362 aa20.23■□□□□ 0.83
U2AF1-201ENST00000291552 SH2D1BO14796 132 aa20.23■□□□□ 0.83
U2AF1-201ENST00000291552 CDK2P24941 298 aa20.23■□□□□ 0.83
U2AF1-201ENST00000291552 AESQ08117 197 aa20.23■□□□□ 0.83
U2AF1-201ENST00000291552 ZFP1Q6P2D0 407 aa20.23■□□□□ 0.83
U2AF1-201ENST00000291552 HEPN1Q6WQI6 88 aa20.23■□□□□ 0.83
U2AF1-201ENST00000291552 SAXO1Q8IYX7 474 aa20.23■□□□□ 0.83
U2AF1-201ENST00000291552 CORO2AQ92828 525 aa20.23■□□□□ 0.83
U2AF1-201ENST00000291552 OR5M11Q96RB7 305 aa20.23■□□□□ 0.83
U2AF1-201ENST00000291552 ZCCHC4Q9H5U6 513 aa20.23■□□□□ 0.83
U2AF1-201ENST00000291552 GLS2Q9UI32 602 aa20.23■□□□□ 0.83
U2AF1-201ENST00000291552 ZFPL1O95159 310 aa20.22■□□□□ 0.83
U2AF1-201ENST00000291552 HTR1DP28221 377 aa20.22■□□□□ 0.83
U2AF1-201ENST00000291552 CDK5R1Q15078 307 aa20.22■□□□□ 0.83
U2AF1-201ENST00000291552 SYS1Q8N2H4 156 aa20.22■□□□□ 0.83
U2AF1-201ENST00000291552 RHOXF1Q8NHV9 184 aa20.22■□□□□ 0.83
U2AF1-201ENST00000291552 SLC29A1Q99808 456 aa20.22■□□□□ 0.83
U2AF1-201ENST00000291552 CITED2Q99967 270 aaPredicted RBP20.22■□□□□ 0.83
U2AF1-201ENST00000291552 MMP28Q9H239 520 aa20.22■□□□□ 0.83
U2AF1-201ENST00000291552 ZNF286AQ9HBT8 521 aa20.22■□□□□ 0.83
U2AF1-201ENST00000291552 AMBNQ9NP70 447 aa20.22■□□□□ 0.83
U2AF1-201ENST00000291552 TRGV10A0A0A0MS01 117 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 ODAMA1E959 279 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 SLC33A1O00400 549 aaPredicted RBP20.21■□□□□ 0.83
U2AF1-201ENST00000291552 IGLV1-47P01700 117 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 CSN2P05814 226 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 OCM2P0CE71 109 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 OCMP0CE72 109 aaPredicted RBP20.21■□□□□ 0.83
U2AF1-201ENST00000291552 CD24P25063 80 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 BDH1Q02338 343 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 IL18R1Q13478 541 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 ZBTB49Q6ZSB9 765 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 ABHD12Q8N2K0 398 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 PDCD1LG2Q9BQ51 273 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 OCSTAMPQ9BR26 566 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 GAL3ST2Q9H3Q3 398 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 NEK6Q9HC98 313 aa20.21■□□□□ 0.83
U2AF1-201ENST00000291552 ERVK13-1Q9NX77 482 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms