RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 MFNGO00587 321 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 MLNRO43193 412 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 SYNGR1O43759 233 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 HEXAP06865 529 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 GABRR1P24046 479 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 CD40P25942 277 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 BLVRBP30043 206 aaPredicted RBP8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 FAUP35544 74 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 GLRXP35754 106 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 OR8G1Q15617 311 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 C11orf91Q3C1V1 193 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 FAM76BQ5HYJ3 339 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 FAAP20Q6NZ36 180 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 HAGHLQ6PII5 290 aaPredicted RBP8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 Q6ZR03 302 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 WFDC8Q8IUA0 241 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 CADM3Q8N126 398 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 WFDC11Q8NEX6 87 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 OR4D10Q8NGI6 311 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 ARHGAP5-AS1Q96IT6 56 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 RADILQ96JH8 1075 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 NKIRAS2Q9NYR9 191 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 MTCH1Q9NZJ7 389 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 NLKQ9UBE8 527 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 FZR1Q9UM11 496 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 ATP6V1G2-DDX39BF2Z307 99 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 TRAPPC2LH3BP13 241 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 AKR7A2O43488 359 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 PFDN1O60925 122 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 MT-ND4P03905 459 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 FCER2P06734 321 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 PTAFRP25105 342 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 BCAP31P51572 246 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 GNG2P59768 71 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 TAF9Q16594 264 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 PNLIPRP3Q17RR3 467 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 PIGYQ3MUY2 71 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 PRSS57Q6UWY2 283 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 TRAPPC6BQ86SZ2 158 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 LRP11Q86VZ4 500 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 BATF2Q8N1L9 274 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 NUDCD2Q8WVJ2 157 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 SLAMF9Q96A28 289 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 PKIBQ9C010 78 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 OR51I2Q9H344 312 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 DPAGT1Q9H3H5 408 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 HRASLSQ9HDD0 168 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 NGBQ9NPG2 151 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.06□□□□□ -1.121e-6■■■■■ 27
PDLIM5-223ENST00000627587 COPZ2Q9P299 210 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 ST3GAL6Q9Y274 331 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 FLNAP21333 2647 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 LRP5LA4QPB2 252 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 TMEM210A6NLX4 147 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 SERPINE3A8MV23 424 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 J3QT63 122 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 RHBDL1O75783 438 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 AKAIN1P0CW23 69 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 ZNF250P15622 560 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 BCL3P20749 454 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 MPZP25189 248 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 RCVRNP35243 200 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 CCR6P51684 374 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 RBM11P57052 281 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 TAS2R19P59542 299 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 IL24Q13007 206 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 ARFRP1Q13795 201 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 ELP2Q6IA86 826 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 VHLLQ6RSH7 139 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 FBXL14Q8N1E6 418 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 SPERTQ8NA61 448 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 OR13G1Q8NGZ3 307 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 TMEM171Q8WVE6 324 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 ST8SIA4Q92187 359 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 WFIKKN1Q96NZ8 548 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 CACNG6Q9BXT2 260 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 PECRQ9BY49 303 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 IFT46Q9NQC8 304 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 PLEKHJ1Q9NW61 149 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 MCUBQ9NWR8 336 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 IL36RNQ9UBH0 155 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 ZNF107Q9UII5 783 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 DUSP13Q9UII6 198 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 POLDIP2Q9Y2S7 368 aa8.05□□□□□ -1.12
PDLIM5-223ENST00000627587 DPRXA6NFQ7 191 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 GEMIN2O14893 280 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 IGHV3-13P01766 116 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 GIFP27352 417 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 KLF3P57682 345 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 SELENOVP59797 346 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 FGF12P61328 243 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 NKAPLQ5M9Q1 402 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 RSBN1Q5VWQ0 802 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 SFRP4Q6FHJ7 346 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 STEAP1BQ6NZ63 245 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 C6orf201Q7Z4U5 140 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 GVQW1Q8N7I0 195 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 TMEM229BQ8NBD8 167 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 OR10AD1Q8NGE0 317 aa8.04□□□□□ -1.12
PDLIM5-223ENST00000627587 GTF3AQ92664 365 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms