RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 NUP210Q8TEM1 1887 aaPredicted RBP11.01□□□□□ -0.65
CTCFL-218ENST00000608440 FAM24AA6NFZ4 105 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 GALR2O43603 387 aaPredicted RBP11□□□□□ -0.65
CTCFL-218ENST00000608440 MPZL1O95297 269 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 RPS4Y1P22090 263 aaKnown RBP11□□□□□ -0.65
CTCFL-218ENST00000608440 DUSP3P51452 185 aaPredicted RBP11□□□□□ -0.65
CTCFL-218ENST00000608440 SLC48A1Q6P1K1 146 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 CMTM2Q8TAZ6 248 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 ZNF596Q8TC21 504 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 ZNF764Q96H86 408 aaPredicted RBP11□□□□□ -0.65
CTCFL-218ENST00000608440 PYGO2Q9BRQ0 406 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 NKX2-4Q9H2Z4 354 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 PIAS2O75928 621 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 VSIG8P0DPA2 414 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 EMP2P54851 167 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 DCST2Q5T1A1 773 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 ZAR1Q86SH2 424 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 TGIF2LYQ8IUE0 185 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 OR52M1Q8NGK5 317 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 SPACA5Q96QH8 159 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 ZNF665Q9H7R5 613 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 ELL3Q9HB65 397 aaPredicted RBP11□□□□□ -0.65
CTCFL-218ENST00000608440 SLC2A9Q9NRM0 540 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 DOCK9Q9BZ29 2069 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 EYSQ5T1H1 3165 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 SLC33A1O00400 549 aaPredicted RBP11□□□□□ -0.65
CTCFL-218ENST00000608440 SOCS1O15524 211 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 RAB38P57729 211 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 EWSR1Q01844 656 aaKnown RBP eCLIP11□□□□□ -0.65
CTCFL-218ENST00000608440 SPATA45Q537H7 98 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 VAX1Q5SQQ9 334 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 GPR157Q5UAW9 335 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 CMTM8Q8IZV2 173 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 D2HGDHQ8N465 521 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 RBMXL1Q96E39 390 aaKnown RBP11□□□□□ -0.65
CTCFL-218ENST00000608440 KTI12Q96EK9 354 aaPredicted RBP11□□□□□ -0.65
CTCFL-218ENST00000608440 LPAR5Q9H1C0 372 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 MEGF9Q9H1U4 602 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 MKKSQ9NPJ1 570 aaPredicted RBP11□□□□□ -0.65
CTCFL-218ENST00000608440 MANBALQ9NQG1 85 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 ST3GAL6Q9Y274 331 aa11□□□□□ -0.65
CTCFL-218ENST00000608440 CCDC163A0A0D9SF12 145 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 EPOPA6NHQ4 379 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 VSTM2BA6NLU5 285 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 NBEAP1P0C6P0 100 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 CEBPBP17676 345 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 IGFBP3P17936 291 aaPredicted RBP10.99□□□□□ -0.65
CTCFL-218ENST00000608440 HIST1H1TP22492 207 aaPredicted RBP10.99□□□□□ -0.65
CTCFL-218ENST00000608440 CAPZBP47756 277 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 SNRPD1P62314 119 aaKnown RBP10.99□□□□□ -0.65
CTCFL-218ENST00000608440 CSNK2A1P68400 391 aaPredicted RBP10.99□□□□□ -0.65
CTCFL-218ENST00000608440 ARFRP1Q13795 201 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 TRMT12Q53H54 448 aaKnown RBP10.99□□□□□ -0.65
CTCFL-218ENST00000608440 CSNK2A3Q8NEV1 391 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 OR2D3Q8NGH3 330 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 PINX1Q96BK5 328 aaKnown RBP10.99□□□□□ -0.65
CTCFL-218ENST00000608440 BTF3L4Q96K17 158 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 GPR84Q9NQS5 396 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 CES1P1Q9UKY3 287 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 SLC5A6Q9Y289 635 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 MYO9BQ13459 2157 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 RAD51DO75771 328 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 OR6A2O95222 327 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 VIPR2P41587 438 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 EMDP50402 254 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 CTXN1P60606 82 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 NHLH1Q02575 133 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 TMEM41BQ5BJD5 291 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 PRR27Q6MZM9 219 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 LYZL2Q7Z4W2 148 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 TMEM217Q8N7C4 229 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 CADM4Q8NFZ8 388 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 FAM3CQ92520 227 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 SPACA7Q96KW9 195 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 LMF2Q9BU23 707 aaKnown RBP10.99□□□□□ -0.65
CTCFL-218ENST00000608440 LRIT1Q9P2V4 623 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 ADAM29Q9UKF5 820 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 WIPI2Q9Y4P8 454 aa10.99□□□□□ -0.65
CTCFL-218ENST00000608440 SCN2AQ99250 2005 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 ARPC3O15145 178 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 HNRNPA1P09651 372 aaKnown RBP eCLIP10.98□□□□□ -0.65
CTCFL-218ENST00000608440 CD70P32970 193 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 BIDP55957 195 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 TRA2BP62995 288 aaKnown RBP10.98□□□□□ -0.65
CTCFL-218ENST00000608440 SLC17A1Q14916 467 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 PLAC9Q5JTB6 97 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 LCN15Q6UWW0 184 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 FBXW12Q6X9E4 464 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 OR4D5Q8NGN0 318 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 OR2T10Q8NGZ9 312 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 ZNF681Q96N22 645 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 MAGT1Q9H0U3 335 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 BANF2Q9H503 90 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 Q9N2K0 584 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 KLHL13Q9P2N7 655 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 PRSS50Q9UI38 385 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 TRAPPC1Q9Y5R8 145 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 REV3LO60673 3130 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 CEACAM18A8MTB9 384 aa10.98□□□□□ -0.65
CTCFL-218ENST00000608440 CEBPZOSA8MTT3 80 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms