RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 A0A1B0GX30 115 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 LINC01548A6NM66 108 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 DHRS7CA6NNS2 312 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 H3BN98 237 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 BUB1B-PAK6H3BSN5 160 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 MGST3O14880 152 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 ZFPL1O95159 310 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 OSMP13725 252 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 PRKACGP22612 351 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 LMO1P25800 156 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 DUSP1P28562 367 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 OR3A1P47881 315 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 RIDAP52758 137 aaKnown RBP4.82□□□□□ -1.64
VRK3-220ENST00000600259 DGCR2P98153 550 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 IL18R1Q13478 541 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 TRIM25Q14258 630 aaKnown RBP4.82□□□□□ -1.64
VRK3-220ENST00000600259 GK3PQ14409 553 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 ZNF146Q15072 292 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 GRK1Q15835 563 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 LINC01559Q495D7 138 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 TPTE2P1Q5T6R2 138 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 HEPN1Q6WQI6 88 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 ZBTB49Q6ZSB9 765 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 C8orf86Q6ZUL3 223 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 RTN4RL2Q86UN3 420 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 THNSL2Q86YJ6 484 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 HS3ST5Q8IZT8 346 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 TRMT10AQ8TBZ6 339 aaKnown RBP4.82□□□□□ -1.64
VRK3-220ENST00000600259 BCAS4Q8TDM0 211 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 ASB17Q8WXJ9 295 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 TFAP2CQ92754 450 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 STMN2Q93045 179 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 SLAMF9Q96A28 289 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 AKR1E2Q96JD6 320 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 CEP19Q96LK0 163 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 NOL4LQ96MY1 436 aaPredicted RBP4.82□□□□□ -1.64
VRK3-220ENST00000600259 LYSTQ99698 3801 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 MCRIP2Q9BUT9 160 aaKnown RBP4.82□□□□□ -1.64
VRK3-220ENST00000600259 CHST6Q9GZX3 395 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 ZNF286AQ9HBT8 521 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 SLC25A19Q9HC21 320 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 ZFP57Q9NU63 452 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 TAGLN3Q9UI15 199 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 SCOCQ9UIL1 159 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 OR52A1Q9UKL2 312 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 UBE2J1Q9Y385 318 aaPredicted RBP4.82□□□□□ -1.64
VRK3-220ENST00000600259 R4GMQ9 66 aa4.82□□□□□ -1.64
VRK3-220ENST00000600259 IGKV1-9A0A0C4DH69 117 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 FAM230AA0A1W2PPH8 454 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 PSMB11A5LHX3 300 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 LEUTXA8MZ59 168 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 OOSP1A8MZH6 123 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 LOC110117498-PIK3R3F6TDL0 507 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 H3BUI4 141 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 M0QZK8 103 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 RAMP3O60896 148 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 ENTPD6O75354 484 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 DNAJC8O75937 253 aaPredicted RBP4.81□□□□□ -1.64
VRK3-220ENST00000600259 INMTO95050 263 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 CLIC3O95833 236 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 HAND1O96004 215 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 MRPL3P09001 348 aaKnown RBP4.81□□□□□ -1.64
VRK3-220ENST00000600259 RAP2AP10114 183 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 CDK2P24941 298 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 PEX2P28328 305 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 SLC6A1P30531 599 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 BRS3P32247 399 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 OR3A4PP47883 348 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 GLIPR1P48060 266 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 FUT6P51993 359 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 P2RX3P56373 397 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 DCTN2Q13561 401 aaKnown RBP4.81□□□□□ -1.64
VRK3-220ENST00000600259 EDDM3AQ14507 147 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 C17orf58Q2M2W7 97 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 HLA-DRB5Q30154 266 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 ZNF829Q3KNS6 432 aaPredicted RBP4.81□□□□□ -1.64
VRK3-220ENST00000600259 FAM98BQ52LJ0 330 aaKnown RBP4.81□□□□□ -1.64
VRK3-220ENST00000600259 CASC10Q5T4H9 136 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 PRAMEF5Q5TYX0 476 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 AADACL4Q5VUY2 407 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 OR52W1Q6IF63 320 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 ZNF322Q6U7Q0 402 aaPredicted RBP4.81□□□□□ -1.64
VRK3-220ENST00000600259 PLEKHG7Q6ZR37 379 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 SLC25A26Q70HW3 274 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 SSX6Q7RTT6 188 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 BCDIN3DQ7Z5W3 292 aaKnown RBP4.81□□□□□ -1.64
VRK3-220ENST00000600259 PIGWQ7Z7B1 504 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 COMMD2Q86X83 199 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 ADGRG5Q8IZF4 528 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 ZNF596Q8TC21 504 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 COQ2Q96H96 371 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 RAX2Q96IS3 184 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 DUX3Q96PT4 197 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 ASCL2Q99929 193 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 ZNF649Q9BS31 505 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 TTTY10Q9BZA0 68 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 PAPOLBQ9NRJ5 636 aaKnown RBP4.81□□□□□ -1.64
VRK3-220ENST00000600259 RBFOX1Q9NWB1 397 aaKnown RBP4.81□□□□□ -1.64
VRK3-220ENST00000600259 TAS2R3Q9NYW6 316 aa4.81□□□□□ -1.64
VRK3-220ENST00000600259 TMEM14AQ9Y6G1 99 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms