RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 TERTO14746 1132 aaKnown RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 SOCS1O15524 211 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 FOXS1O43638 330 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 SSSCA1O60232 199 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 GCGP01275 180 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 RCC1P18754 421 aaPredicted RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 EPHA1P21709 976 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 KIR2DL1P43626 348 aaPredicted RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 P2RY4P51582 365 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 NKAIN1Q4KMZ8 207 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 BTNL8Q6UX41 500 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 CPEB2Q7Z5Q1 589 aaKnown RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 MRGPRGQ86SM5 289 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 Q8IYB0 196 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 TMEM104Q8NE00 496 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 OR56B2PQ8NGI1 322 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 OR10D4PQ8NGN7 298 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 OR13G1Q8NGZ3 307 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 OR2AE1Q8NHA4 323 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 SMIM7Q9BQ49 75 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 EMC6Q9BV81 110 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 NRSN2Q9GZP1 204 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 C5orf66Q9H5L9 145 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 Q9N2K0 584 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 GPR173Q9NS66 373 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 OR5AC2Q9NZP5 309 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 GNG13Q9P2W3 67 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 B3GAT1Q9P2W7 334 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 VAX2Q9UIW0 290 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 MCTS1Q9ULC4 181 aaKnown RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 BOKQ9UMX3 212 aaPredicted RBP3.12□□□□□ -1.91
VMP1-216ENST00000592790 ST3GAL6Q9Y274 331 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 CEP250Q9BV73 2442 aa3.12□□□□□ -1.91
VMP1-216ENST00000592790 PRUNE2Q8WUY3 3088 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 A0A1B0GU03 582 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 OR5H15A6NDH6 313 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 ARGFXA6NJG6 315 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 OR5H1A6NKK0 313 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 ZFP92A6NM28 416 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 TRDCB7Z8K6 153 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 H3BQ15 152 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 LDLRAD4O15165 306 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 SCRG1O75711 98 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 SCGB1D1O95968 90 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 PNPP00491 289 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 CD5P06127 495 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 OR5AC1P0C628 307 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 GLB1P16278 677 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 LPAR6P43657 344 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 DSCR4P56555 118 aaPredicted RBP3.11□□□□□ -1.91
VMP1-216ENST00000592790 EWSR1Q01844 656 aaKnown RBP eCLIP3.11□□□□□ -1.91
VMP1-216ENST00000592790 KCNMB1Q16558 191 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 TMEM241Q24JQ0 296 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 C2orf68Q2NKX9 166 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 DEFB133Q30KQ1 61 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 ATRAIDQ6UW56 229 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 PARM1Q6UWI2 310 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 DHRS11Q6UWP2 260 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 ZNF573Q86YE8 665 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 OR10A7Q8NGE5 316 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 OR1F12Q8NHA8 337 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 ZNF721Q8TF20 911 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 PATE1Q8WXA2 126 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 CORO2AQ92828 525 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 MR1Q95460 341 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 LHX4Q969G2 390 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 SPACA9Q96E40 222 aaPredicted RBP3.11□□□□□ -1.91
VMP1-216ENST00000592790 ADAT3Q96EY9 351 aaPredicted RBP3.11□□□□□ -1.91
VMP1-216ENST00000592790 MARS2Q96GW9 593 aaKnown RBP3.11□□□□□ -1.91
VMP1-216ENST00000592790 ACY3Q96HD9 319 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 TXNDC17Q9BRA2 123 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 LRRC61Q9BV99 259 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 TM2D1Q9BX74 207 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 KCNK15Q9H427 330 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 CALHM2Q9HA72 323 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 COA4Q9NYJ1 87 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 DHCR7Q9UBM7 475 aaKnown RBP3.11□□□□□ -1.91
VMP1-216ENST00000592790 GAB2Q9UQC2 676 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 OSGIN2Q9Y236 505 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 POLDIP2Q9Y2S7 368 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 SLCO1B1Q9Y6L6 691 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 CEACAM18A8MTB9 384 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 K7EQS6 105 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 MPPED1O15442 326 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 TRAPPC6AO75865 159 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 ACTL6AO96019 429 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 CYB5R3P00387 301 aaPredicted RBP3.11□□□□□ -1.91
VMP1-216ENST00000592790 DBHP09172 617 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 CST2P09228 141 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 ARR3P36575 388 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 FOLR3P41439 243 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 STARD6P59095 220 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 HTD2P86397 168 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 FMODQ06828 376 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 FZD5Q13467 585 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 HIKESHIQ53FT3 197 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 TMEM31Q5JXX7 168 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 FNDC7Q5VTL7 733 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 OR2A2Q6IF42 318 aa3.11□□□□□ -1.91
VMP1-216ENST00000592790 C20orf196Q8IYI0 205 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms