RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 OR5M8Q8NGP6 311 aa9.56□□□□□ -0.88
SHMT2-216ENST00000554975 OR8S1Q8NH09 359 aa9.56□□□□□ -0.88
SHMT2-216ENST00000554975 ANGPTL6Q8NI99 470 aa9.56□□□□□ -0.88
SHMT2-216ENST00000554975 NABP1Q96AH0 204 aa9.56□□□□□ -0.88
SHMT2-216ENST00000554975 PLPPR2Q96GM1 343 aa9.56□□□□□ -0.88
SHMT2-216ENST00000554975 ADGRG7Q96K78 797 aa9.56□□□□□ -0.88
SHMT2-216ENST00000554975 TMEM204Q9BSN7 226 aa9.56□□□□□ -0.88
SHMT2-216ENST00000554975 POFUT1Q9H488 388 aa9.56□□□□□ -0.88
SHMT2-216ENST00000554975 RNF122Q9H9V4 155 aa9.56□□□□□ -0.88
SHMT2-216ENST00000554975 PCDHB16Q9NRJ7 776 aa9.56□□□□□ -0.88
SHMT2-216ENST00000554975 SLC23A1Q9UHI7 598 aa9.56□□□□□ -0.88
SHMT2-216ENST00000554975 PLSCR5A0PG75 271 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 MEIS3P1A6NDR6 274 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 OR6C6A6NF89 314 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 LMX1BO60663 402 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 CDC14BO60729 498 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 RAMP1O60894 148 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 MPIG6BO95866 241 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 FCER2P06734 321 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 ZNF35P13682 527 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 NAT1P18440 290 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 NFYAP23511 347 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-216ENST00000554975 CD34P28906 385 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 SEC61A1P61619 476 aaKnown RBP9.55□□□□□ -0.88
SHMT2-216ENST00000554975 SRSF4Q08170 494 aaKnown RBP9.55□□□□□ -0.88
SHMT2-216ENST00000554975 OPCMLQ14982 345 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 SCGB2B2Q4G0G5 96 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 C6orf183Q5T699 404 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 ATPAF1Q5TC12 328 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-216ENST00000554975 IL17RELQ6ZVW7 336 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 FAM214BQ7L5A3 538 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 AAED1Q7RTV5 226 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 ZNF100Q8IYN0 542 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 MUC20Q8N307 709 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-216ENST00000554975 OR11H4Q8NGC9 324 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 NEUROG1Q92886 237 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 GMPPAQ96IJ6 420 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-216ENST00000554975 PHB2Q99623 299 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 CHIAQ9BZP6 476 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 LPAR5Q9H1C0 372 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 C12orf49Q9H741 205 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 TMEM38BQ9NVV0 291 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 ELOVL5Q9NYP7 299 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 PIPOXQ9P0Z9 390 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 KIF25Q9UIL4 384 aa9.55□□□□□ -0.88
SHMT2-216ENST00000554975 NOP16Q9Y3C1 178 aaKnown RBP9.55□□□□□ -0.88
SHMT2-216ENST00000554975 IGHV4-30-2A0A087WSY4 118 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 IGHV3-15A0A0B4J1V0 119 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 A0A0B4J2A0 478 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 RFPL4AA6NLU0 287 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 RFPL4AL1F8VTS6 287 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 G3V3Q6 166 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 M0QYG6 137 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 MFNGO00587 321 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 XRCC2O43543 280 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 SPRY1O43609 319 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-216ENST00000554975 CYTIPO60759 359 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 CRTAPO75718 401 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-216ENST00000554975 B3GALNT1O75752 331 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 CD8AP01732 235 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 HLA-AP01891 365 aaKnown RBP9.54□□□□□ -0.88
SHMT2-216ENST00000554975 DANCRP0C864 163 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 ZNF735P0CB33 412 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 HLA-GP17693 338 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 S100A11P31949 105 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 RPS27AP62979 156 aaKnown RBP9.54□□□□□ -0.88
SHMT2-216ENST00000554975 UBA52P62987 128 aaKnown RBP9.54□□□□□ -0.88
SHMT2-216ENST00000554975 DHRS2Q13268 280 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 ARFRP1Q13795 201 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 ZNF345Q14585 488 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 SURF2Q15527 256 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-216ENST00000554975 GRK1Q15835 563 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 TMEM249Q2WGJ8 235 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 GFOD2Q3B7J2 385 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 MOGAT2Q3SYC2 334 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 LGALSLQ3ZCW2 172 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-216ENST00000554975 OR10K2Q6IF99 312 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 LHFPL2Q6ZUX7 228 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 SLC16A14Q7RTX9 510 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 TMED4Q7Z7H5 227 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 SLC25A42Q86VD7 318 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 WFDC8Q8IUA0 241 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 PAQR4Q8N4S7 273 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-216ENST00000554975 SEMA6DQ8NFY4 1073 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 OR4D10Q8NGI6 311 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 OR5H2Q8NGV7 314 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 OR6K3Q8NGY3 331 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 ZNF385AQ96PM9 386 aaKnown RBP9.54□□□□□ -0.88
SHMT2-216ENST00000554975 TM2D1Q9BX74 207 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 SRXN1Q9BYN0 137 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 LINC00470Q9BZP3 86 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 TINAGL1Q9GZM7 467 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-216ENST00000554975 CA10Q9NS85 328 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 SHPKQ9UHJ6 478 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 SESN1Q9Y6P5 492 aa9.54□□□□□ -0.88
SHMT2-216ENST00000554975 IGKV3D-15A0A087WSY6 115 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 FXYD6-FXYD2A0A087WZ82 144 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 A0A0D9SG52 128 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 ZNF716A6NP11 495 aa9.53□□□□□ -0.88
SHMT2-216ENST00000554975 CEACAM18A8MTB9 384 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms