RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 NET1Q7Z628 596 aaPredicted RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ANKRD37Q7Z713 158 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 DHDDSQ86SQ9 333 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ANGPTL5Q86XS5 388 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 CALHM1Q8IU99 346 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ERI1Q8IV48 349 aaKnown RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 LAX1Q8IWV1 398 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SKA3Q8IX90 412 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 C9orf40Q8IXQ3 194 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SYS1Q8N2H4 156 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 C10orf111Q8N326 155 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 FGFRL1Q8N441 504 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 RAB42Q8N4Z0 105 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF283Q8N7M2 679 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF615Q8N8J6 731 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ACOT4Q8N9L9 421 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 CDRT4Q8N9R6 151 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 LRRC75AQ8NAA5 344 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 HSD17B11Q8NBQ5 300 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR2AK2Q8NG84 335 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR11G2Q8NGC1 345 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR9Q2Q8NGE9 314 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR51G2Q8NGK0 314 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR4A4PQ8NGN8 299 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR1L6Q8NGR2 347 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR9A4Q8NGU2 314 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR13D1Q8NGV5 346 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR10K1Q8NGX5 313 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR51Q1Q8NH59 317 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR51A7Q8NH64 312 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR52I2Q8NH67 350 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 FAM110BQ8TC76 370 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SLC2A12Q8TD20 617 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 MAGEE2Q8TD90 523 aaPredicted RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 RNASEH2CQ8TDP1 164 aaKnown RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 TNFAIP8L1Q8WVP5 186 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SPRYD4Q8WW59 207 aaPredicted RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 TMEM234Q8WY98 164 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 PIK3R3Q92569 461 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 GGHQ92820 318 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 UFD1Q92890 307 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 PIGTQ969N2 578 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 UBE2E3Q969T4 207 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 RERGQ96A58 199 aaPredicted RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 PTH2Q96A98 100 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ISOC2Q96AB3 205 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 PINX1Q96BK5 328 aaKnown RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 C10orf35Q96D05 121 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 MED8Q96G25 268 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF486Q96H40 463 aaPredicted RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SFRP2Q96HF1 295 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SH3YL1Q96HL8 342 aaPredicted RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 FAM210BQ96KR6 192 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 VSTM2LQ96N03 204 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF75AQ96N20 296 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 CCDC115Q96NT0 180 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 MUS81Q96NY9 551 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 MS4A10Q96PG2 267 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR52B2Q96RD2 323 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 HBEGFQ99075 208 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 STACQ99469 402 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SERPINI1Q99574 410 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 C2orf88Q9BSF0 95 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 PCGF1Q9BSM1 259 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 RSG1Q9BU20 258 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OSBPL11Q9BXB4 747 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 MAP1LC3CQ9BXW4 147 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 YTHDF1Q9BYJ9 559 aaKnown RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ULBP3Q9BZM4 244 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ARV1Q9H2C2 271 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SLA2Q9H6Q3 261 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 PPP1R3EQ9H7J1 279 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 FKRPQ9H9S5 495 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 CXorf21Q9HAI6 301 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 TMEM27Q9HBJ8 222 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 EQTNQ9NQ60 294 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 MIEF1Q9NQG6 463 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 NIT2Q9NQR4 276 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 STARD5Q9NSY2 213 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 C1orf109Q9NX04 203 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 BABAM2Q9NXR7 383 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 COA4Q9NYJ1 87 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SLC25A37Q9NYZ2 338 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 MAT2BQ9NZL9 334 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ABI3Q9P2A4 366 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 P2RX2Q9UBL9 471 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 VPS29Q9UBQ0 182 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 MIOXQ9UGB7 285 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 GNG8Q9UK08 70 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 IKZF2Q9UKS7 526 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF346Q9UL40 294 aaKnown RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 RAB26Q9ULW5 256 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 B9D1Q9UPM9 204 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SLC7A11Q9UPY5 501 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 DHDHQ9UQ10 334 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 PSG11Q9UQ72 335 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 BAIAP2Q9UQB8 552 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SLC6A5Q9Y345 797 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms