RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 HAVCR2Q8TDQ0 301 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 PPA2Q9H2U2 334 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 RHOFQ9HBH0 211 aa19.05■□□□□ 0.64
SMPD1-209ENST00000533196 TMEM82A0PJX8 343 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 FAM90A8PA6NJQ4 464 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 EBAG9O00559 213 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 IGHA1P01876 353 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 OCM2P0CE71 109 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 OCMP0CE72 109 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-209ENST00000533196 COX7A1P24310 79 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 POU3F4P49335 361 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 RAB40BQ12829 278 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 PDZK1IP1Q13113 114 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 C11orf88Q6PI97 169 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 ZNF782Q6ZMW2 699 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-209ENST00000533196 ZBTB49Q6ZSB9 765 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 ZNF714Q96N38 554 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 ALG8Q9BVK2 526 aa19.04■□□□□ 0.64
SMPD1-209ENST00000533196 RANBP3Q9H6Z4 567 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-209ENST00000533196 LOC100130705A0A1B0GUX0 176 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 VGLL3A8MV65 326 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 INMTO95050 263 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 ALX3O95076 343 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 BCL3P20749 454 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 NPBWR2P48146 333 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 BMXP51813 675 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 ASPHD2Q6ICH7 369 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 SLC35E4Q6ICL7 350 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 PQLC1Q8N2U9 271 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 ZNF676Q8N7Q3 588 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 OR11H6Q8NGC7 330 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 OR13C3Q8NGS6 347 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 FOXRED1Q96CU9 486 aaPredicted RBP19.03■□□□□ 0.64
SMPD1-209ENST00000533196 SLC29A1Q99808 456 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 MMP27Q9H306 513 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 TCF7L1Q9HCS4 588 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 MRPS18AQ9NVS2 196 aaKnown RBP19.03■□□□□ 0.64
SMPD1-209ENST00000533196 RBFOX1Q9NWB1 397 aaKnown RBP19.03■□□□□ 0.64
SMPD1-209ENST00000533196 AASSQ9UDR5 926 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 LINC00312Q9Y6C7 94 aa19.03■□□□□ 0.64
SMPD1-209ENST00000533196 ODF3BA8MYP8 253 aa19.02■□□□□ 0.64
SMPD1-209ENST00000533196 MGST3O14880 152 aa19.02■□□□□ 0.64
SMPD1-209ENST00000533196 IGHV1-8P0DP01 117 aa19.02■□□□□ 0.64
SMPD1-209ENST00000533196 ERP29P30040 261 aaKnown RBP19.02■□□□□ 0.64
SMPD1-209ENST00000533196 KIR2DS4P43632 304 aa19.02■□□□□ 0.64
SMPD1-209ENST00000533196 GRK1Q15835 563 aa19.02■□□□□ 0.64
SMPD1-209ENST00000533196 CRIP3Q6Q6R5 217 aa19.02■□□□□ 0.64
SMPD1-209ENST00000533196 LHFPL3Q86UP9 236 aa19.02■□□□□ 0.64
SMPD1-209ENST00000533196 MALSU1Q96EH3 234 aa19.02■□□□□ 0.64
SMPD1-209ENST00000533196 CDCA4Q9BXL8 241 aa19.02■□□□□ 0.64
SMPD1-209ENST00000533196 RPL36Q9Y3U8 105 aaKnown RBP19.02■□□□□ 0.64
SMPD1-209ENST00000533196 WIPF1O43516 503 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 KDM4BO94953 1096 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 CCDC159P0C7I6 412 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 PRKACAP17612 351 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 GABRR1P24046 479 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 GABRA5P31644 462 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 LY6EQ16553 131 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 ZNF626Q68DY1 528 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 SAXO1Q8IYX7 474 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 OR4C13Q8NGP0 309 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 OR10AC1Q8NH08 325 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 RDH12Q96NR8 316 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 ZCCHC4Q9H5U6 513 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 HMG20AQ9NP66 347 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 FAM118AQ9NWS6 357 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 ERVK13-1Q9NX77 482 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 MYRFQ9Y2G1 1151 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 PCDHGB5Q9Y5G0 923 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 KIAA2026Q5HYC2 2103 aa19.01■□□□□ 0.63
SMPD1-209ENST00000533196 TMEM212A6NML5 194 aa19■□□□□ 0.63
SMPD1-209ENST00000533196 SH2D1BO14796 132 aa19■□□□□ 0.63
SMPD1-209ENST00000533196 ARG1P05089 322 aa19■□□□□ 0.63
SMPD1-209ENST00000533196 EDDM3AQ14507 147 aa19■□□□□ 0.63
SMPD1-209ENST00000533196 KLHL22Q53GT1 634 aa19■□□□□ 0.63
SMPD1-209ENST00000533196 TCF23Q7RTU1 214 aa19■□□□□ 0.63
SMPD1-209ENST00000533196 OR52N4Q8NGI2 321 aa19■□□□□ 0.63
SMPD1-209ENST00000533196 OR51A4Q8NGJ6 313 aa19■□□□□ 0.63
SMPD1-209ENST00000533196 OR13C9Q8NGT0 318 aa19■□□□□ 0.63
SMPD1-209ENST00000533196 ZNF649Q9BS31 505 aa19■□□□□ 0.63
SMPD1-209ENST00000533196 COMMD4Q9H0A8 199 aa19■□□□□ 0.63
SMPD1-209ENST00000533196 IL36RNQ9UBH0 155 aa19■□□□□ 0.63
SMPD1-209ENST00000533196 FUOMA2VDF0 154 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 PSPNO60542 156 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 LMO1P25800 156 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 LPCAT4Q643R3 524 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 LHFPL4Q7Z7J7 247 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 SERPINA12Q8IW75 414 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 PARP16Q8N5Y8 322 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 OR5D14Q8NGL3 314 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 OR5AK2Q8NH90 309 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 PIFOQ8TCI5 191 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 JAM3Q9BX67 310 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 NPFFR1Q9GZQ6 430 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 ISG20L2Q9H9L3 353 aaKnown RBP18.99■□□□□ 0.63
SMPD1-209ENST00000533196 AMBNQ9NP70 447 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 EXOSC4Q9NPD3 245 aaKnown RBP18.99■□□□□ 0.63
SMPD1-209ENST00000533196 UBE2J1Q9Y385 318 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-209ENST00000533196 SESN1Q9Y6P5 492 aa18.99■□□□□ 0.63
SMPD1-209ENST00000533196 CMYA5Q8N3K9 4069 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms