RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CMTM1Q8IZ96 169 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 SHISA5Q8N114 240 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 OR2C3Q8N628 320 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 RRAGCQ9HB90 399 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 G6PC2Q9NQR9 355 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 EHFQ9NZC4 300 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 PRSS50Q9UI38 385 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 PRR19A6NJB7 356 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 AHRRA9YTQ3 701 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 H7BYZ3 331 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 K7EQS6 105 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 AQP7O14520 342 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 FGF17O60258 216 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 SCGB1D2O95969 90 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 DBHP09172 617 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 ASAH2BP0C7U1 165 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 MMP9P14780 707 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 SLC11A1P49279 550 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 EMDP50402 254 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 NTHL1P78549 312 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF74Q16587 644 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 FAM110CQ1W6H9 321 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 TCTN1Q2MV58 587 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 MPV17LQ2QL34 196 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 TRIM61Q5EBN2 209 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 LCN10Q6JVE6 187 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 CBLN3Q6UW01 205 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 SLC24A5Q71RS6 500 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF765Q7L2R6 523 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 NPAS4Q8IUM7 802 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 CAPNS2Q96L46 248 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 LANCL2Q9NS86 450 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 TMEM74BQ9NUR3 256 aa7.1□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF701Q9NV72 531 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-214ENST00000530886 IGKV1D-42A0A075B6H8 117 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 NPIPA5A0A0B4J1W7 369 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 CCDC85CA6NKD9 419 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 RNF212BA8MTL3 300 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 NPIPA7E9PJI5 369 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 H3BSH0 61 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 RAD51DO75771 328 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 KBTBD11O94819 623 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 NPIPA8P0DM63 369 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 IGLC2P0DOY2 106 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 IGLC3P0DOY3 106 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 TNFSF4P23510 183 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 UCP1P25874 307 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 UCP3P55916 312 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 ZNF141Q15928 474 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 ALG10Q5BKT4 473 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 CFAP161Q6P656 301 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 PSRC1Q6PGN9 363 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-214ENST00000530886 TMEM144Q7Z5S9 345 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 ZAR1Q86SH2 424 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 SULF2Q8IWU5 870 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 FAM89BQ8N5H3 189 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 CMTM2Q8TAZ6 248 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 C1orf147Q96MC9 270 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-214ENST00000530886 TSPAN32Q96QS1 320 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 PLEKHF2Q9H8W4 249 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 SRA1Q9HD15 236 aaKnown RBP7.09□□□□□ -1.27
CSDE1-214ENST00000530886 LRIT1Q9P2V4 623 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 LOC107986453A0A1B0GWG9 222 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 A0A1W2PQ45 241 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-214ENST00000530886 A0A1W2PQY0 241 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 SYNDIG1LA6NDD5 238 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 C9orf172C9J069 976 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 MSTNO14793 375 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 ATXN7O15265 892 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-214ENST00000530886 NKX2-2O95096 273 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 OR6A2O95222 327 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 CAPZBP47756 277 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 TAS2R30P59541 319 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 ERVS71-1P61550 626 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 BSXQ3C1V8 233 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 MRGPRGQ86SM5 289 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 PNKDQ8N490 385 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 C2orf73Q8N5S3 287 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-214ENST00000530886 Q8N976 141 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 OR2A1Q8NGT9 310 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 OR5B3Q8NH48 314 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 TOMM40LQ969M1 308 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 WDYHV1Q96HA8 205 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 CYYR1Q96J86 154 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 PAM16Q9Y3D7 125 aa7.09□□□□□ -1.27
CSDE1-214ENST00000530886 COL5A1P20908 1838 aaPredicted RBP7.09□□□□□ -1.28
CSDE1-214ENST00000530886 IFNL4K9M1U5 179 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 NUPR1O60356 82 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 DDAH2O95865 285 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 BGLAPP02818 100 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 ACRP10323 421 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 CD99P14209 185 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 FOSL2P15408 326 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 GRK6P43250 576 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM50BP56557 158 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 CTXN1P60606 82 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 YPEL3P61236 119 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-214ENST00000530886 RPL23P62829 140 aaKnown RBP7.08□□□□□ -1.28
CSDE1-214ENST00000530886 MGAT2Q10469 447 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 GNMTQ14749 295 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms