RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SPAG1Q07617 926 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 FAM27D1Q5T7N8 215 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 THOC7Q6I9Y2 204 aaKnown RBP0.97□□□□□ -2.25
SMC4-227ENST00000497984 SLC35D2Q76EJ3 337 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 OTUD6AQ7L8S5 288 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 TMEM25Q86YD3 366 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 DNAAF3Q8N9W5 541 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 OR4K13Q8NH42 304 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 OR51A7Q8NH64 312 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 UBA3Q8TBC4 463 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 SMIM8Q96KF7 97 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 METTL26Q96S19 204 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 TMED9Q9BVK6 235 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 BLZF1Q9H2G9 400 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 MRPL16Q9NX20 251 aaKnown RBP0.97□□□□□ -2.25
SMC4-227ENST00000497984 NAGKQ9UJ70 344 aa0.97□□□□□ -2.25
SMC4-227ENST00000497984 ZNF706Q9Y5V0 76 aaPredicted RBP0.97□□□□□ -2.25
SMC4-227ENST00000497984 C2orf16Q68DN1 1984 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 MYO9BQ13459 2157 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 LOC100653049A0A140TA62 436 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 A0A1W2PRF3 423 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 A0A1W2PRM7 423 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 CENPXA8MT69 81 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 A8MWP4 228 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 H3BMM0 161 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 LY6LH3BQJ8 138 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 FFAR1O14842 300 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 RNF113AO15541 343 aaKnown RBP0.96□□□□□ -2.26
SMC4-227ENST00000497984 KRT34O76011 436 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 OR5AL1P0C617 328 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 CGB3P0DN86 165 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 CGB7P0DN87 165 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 RALBP11234 206 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 SRMP19623 302 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 CCT6AP40227 531 aaKnown RBP0.96□□□□□ -2.26
SMC4-227ENST00000497984 RPL31P62899 125 aaKnown RBP0.96□□□□□ -2.26
SMC4-227ENST00000497984 SLC35B1P78383 322 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 TOMM34Q15785 309 aaPredicted RBP0.96□□□□□ -2.26
SMC4-227ENST00000497984 TMEM241Q24JQ0 296 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 ZNF404Q494X3 552 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 ATP6AP1LQ52LC2 224 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 ASCL4Q6XD76 172 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 CYHR1Q6ZMK1 362 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 ZNF767PQ75MW2 155 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 ZNF567Q8N184 647 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 CCNYL1Q8N7R7 359 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 OR6K6Q8NGW6 343 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 NDNFQ8TB73 568 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 NT5CQ8TCD5 201 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 UBE2WQ96B02 151 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 OR8B2Q96RD0 313 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 TSNAXQ99598 290 aaKnown RBP0.96□□□□□ -2.26
SMC4-227ENST00000497984 CHID1Q9BWS9 393 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 SRRQ9GZT4 340 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 IL22Q9GZX6 179 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 KIR3DX1Q9H7L2 352 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 PEF1Q9UBV8 284 aaKnown RBP0.96□□□□□ -2.26
SMC4-227ENST00000497984 INSIG2Q9Y5U4 225 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 KPTNQ9Y664 436 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 BRCA1P38398 1863 aaKnown RBP0.96□□□□□ -2.26
SMC4-227ENST00000497984 NEURL4Q96JN8 1562 aa0.96□□□□□ -2.26
SMC4-227ENST00000497984 LOC389332A0A1B0GUA5 103 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 H0YIV9 168 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 M0R1B8 84 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 CASC3O15234 703 aaKnown RBP0.95□□□□□ -2.26
SMC4-227ENST00000497984 HMMRO75330 724 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 PSIP1O75475 530 aaKnown RBP0.95□□□□□ -2.26
SMC4-227ENST00000497984 PLEKHA8P1O95397 391 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 IMPA1P29218 277 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 P2RY2P41231 377 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 BCAP31P51572 246 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 IFFO1Q0D2I5 559 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 SSX1Q16384 188 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 ATP6V1FQ16864 119 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 PYCR3Q53H96 274 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 TMEM215Q68D42 235 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 FBXO36Q8NEA4 188 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 OR10D4PQ8NGN7 298 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 TOP1MTQ969P6 601 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 KIAA1143Q96AT1 154 aaPredicted RBP0.95□□□□□ -2.26
SMC4-227ENST00000497984 SHCBP1LQ9BZQ2 653 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 COA1Q9GZY4 146 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 GABARAPL1Q9H0R8 117 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 RGCCQ9H4X1 137 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 ZNF286AQ9HBT8 521 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 C6orf50Q9HD87 102 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 RBM12B-AS1Q9P1G2 102 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 SLC7A11Q9UPY5 501 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 CFL2Q9Y281 166 aa0.95□□□□□ -2.26
SMC4-227ENST00000497984 IGKV1D-37A0A075B6S9 117 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 A0A0J9YYE9 177 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 GOLGA6L7A0A1B0GV03 622 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 H7C2Y5 167 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 TRBC1P01850 177 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 SFTPCP11686 197 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 TAC1P20366 129 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 CRABP2P29373 138 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 PEX19P40855 299 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 DYNC1I2Q13409 638 aaKnown RBP0.94□□□□□ -2.26
SMC4-227ENST00000497984 DOC2AQ14183 400 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms