RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 ABHD12Q8N2K0 398 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 COMMD1Q8N668 190 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 IQCF1Q8N6M8 205 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 MUC7Q8TAX7 377 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 CHPT1Q8WUD6 406 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 TFAP2CQ92754 450 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 STMN2Q93045 179 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 CREB3L1Q96BA8 519 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 OTULINQ96BN8 352 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 CEP19Q96LK0 163 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 NIPSNAP1Q9BPW8 284 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 MROQ9BYG7 248 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 MAGIXQ9H6Y5 334 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 MOB1AQ9H8S9 216 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 GPR173Q9NS66 373 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 MTCH1Q9NZJ7 389 aa6.48□□□□□ -1.37
USP39-216ENST00000490193 UBE2J1Q9Y385 318 aaPredicted RBP6.48□□□□□ -1.37
USP39-216ENST00000490193 A0A087X0M5 115 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 A0A1B0GTI1 187 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 A0A1B0GX30 115 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 FAM90A18PA6NE21 464 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 ARRDC5A6NEK1 342 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 FAM90A16PA6NEW6 464 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 FAM90A20PA6NIJ5 464 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 SH2D7A6NKC9 451 aaPredicted RBP6.47□□□□□ -1.37
USP39-216ENST00000490193 FAM90A9PA6NNJ1 464 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 FAM90A12PA8MX19 464 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 FAM90A5PA8MXJ8 464 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 PRR32B1ATL7 298 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 F8VVB4 439 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 F8VWA3 439 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 H3BN98 237 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 LY6LH3BQJ8 138 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 MGST3O14880 152 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 PSPNO60542 156 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 SASH3O75995 380 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 FAM90A15PP0C7V4 464 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 FAM90A13PP0C7W8 464 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 FAM90A14PP0C7W9 464 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 FAM90A24PP0C7X0 464 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 CCL1P22362 96 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 PEX2P28328 305 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 CEACAM3P40198 252 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 OR3A4PP47883 348 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 RIDAP52758 137 aaKnown RBP6.47□□□□□ -1.37
USP39-216ENST00000490193 ZNF91Q05481 1191 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 MFGE8Q08431 387 aaPredicted RBP6.47□□□□□ -1.37
USP39-216ENST00000490193 EDDM3AQ14507 147 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 SNAPC1Q16533 368 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 HLA-DRB5Q30154 266 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 SLX4IPQ5VYV7 408 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 OR2T5Q6IEZ7 315 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 CCDC144NLQ6NUI1 221 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 HEPN1Q6WQI6 88 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 C18orf65Q6ZTR6 163 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 ZNF329Q86UD4 541 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 ANGPTL5Q86XS5 388 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 THNSL2Q86YJ6 484 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 CPOQ8IVL8 374 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 TPRX1Q8N7U7 411 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 KLHL30-AS1Q8NEE0 82 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 OR10G2Q8NGC3 310 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 OR52N4Q8NGI2 321 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 OR14K1Q8NGZ2 314 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 OR2T29Q8NH02 315 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 BCAS4Q8TDM0 211 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 ASB17Q8WXJ9 295 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 CORO2AQ92828 525 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 GAL3ST2Q9H3Q3 398 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 REEP1Q9H902 201 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 PAPOLBQ9NRJ5 636 aaKnown RBP6.47□□□□□ -1.37
USP39-216ENST00000490193 TAS2R1Q9NYW7 299 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 ACTR3BQ9P1U1 418 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 MOB4Q9Y3A3 225 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 SAMHD1Q9Y3Z3 626 aaKnown RBP6.47□□□□□ -1.37
USP39-216ENST00000490193 TMEM14AQ9Y6G1 99 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 HSPE1-MOB4S4R3N1 261 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 U3KQV3 271 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 KIAA2026Q5HYC2 2103 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 CSMD3Q7Z407 3707 aa6.47□□□□□ -1.37
USP39-216ENST00000490193 LCE6AA0A183 80 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 TCRBV5S2A0A599 114 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 LOC110117498-PIK3R3F6TDL0 507 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 BUB1B-PAK6H3BSN5 160 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 FGF16O43320 207 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 HAND1O96004 215 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 HMGN1P05114 100 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 ATP6V1B2P21281 511 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 MNDAP41218 407 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 HCCSP53701 268 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 P2RX3P56373 397 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 CDK5Q00535 292 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 GINS1Q14691 196 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 ZNF146Q15072 292 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 GRK1Q15835 563 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 C9orf152Q5JTZ5 239 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 TPTE2P1Q5T6R2 138 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 C9orf66Q5T8R8 295 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 BAIAP2L2Q6UXY1 529 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 ZNF695Q8IW36 515 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms